Pairwise Alignments

Query, 224 a.a., DnaJ-class molecular chaperone CbpA from Sphingobium sp. HT1-2

Subject, 306 a.a., curved DNA-binding protein from Escherichia coli ECRC62

 Score =  102 bits (253), Expect = 1e-26
 Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 29/229 (12%)

Query: 1   LSSPYEKLGVAPSASAEEIQKAYRKLAKKLHPDLNPGDKAAEDKFKDVAGAYDLLSDADK 60
           L   Y  +GV P+   + I+ AYR+LA+K HPD++  +  AE +FK+VA A+++LSD  +
Sbjct: 3   LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQR 61

Query: 61  RRRYDAGEIDETGAERPPQQFYRDYAGSDFGRYASDAGYADFGGNDDVFADLFRRNAEAR 120
           R  YD     +    R   QF R +   D   + ++    DF   DD+F+ +F ++A   
Sbjct: 62  RAEYD-----QMWQHRNDPQFNRQFHHGDGQSFNAE----DF---DDIFSSIFGQHARQS 109

Query: 121 ANR---RGQDLLYRLAISFADSVTGVSQRLT--LPGGG-----------TLDVTIPPGIL 164
             R   RG D+   +A+   +++T   + ++  LP              TL+V IP G+ 
Sbjct: 110 RQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVG 169

Query: 165 DGQTLRLKGKGAAGMGKGGPGDALIEIEVKPDARFTRDGDDITIDLPIS 213
           +GQ +RLKG+G  G   G  GD  + I + P   F   G D+ I +P+S
Sbjct: 170 NGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS 218



 Score = 36.2 bits (82), Expect = 7e-07
 Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)

Query: 125 GQDLLYRLAISFADSVTGVSQRLTLPG-GGTLDVTIPPGILDGQTLRLKGKGAAGMGKGG 183
           GQDL   + +S  ++  G   ++T+P    ++ +TIPPG   GQ LR+KGKG     + G
Sbjct: 208 GQDLEIVVPVSPWEAALGA--KVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTG 265

Query: 184 PGDALIEIEVKP 195
              A+++I + P
Sbjct: 266 DLYAVLKIVMPP 277