Pairwise Alignments

Query, 188 a.a., Transcriptional regulator, AcrR family from Sphingobium sp. HT1-2

Subject, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

 Score = 52.8 bits (125), Expect = 4e-12
 Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 11/160 (6%)

Query: 7   RNAAQSRETLLAAATEEFASHGLAGARIDRIAQAAGISKPMLYTYFGDKEALFDAALTQE 66
           + A ++R+ +L AA + F+  G  G RI++I+  A  +  M+Y YFG KE LF + L   
Sbjct: 11  QQADRTRDNILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFISVLEHI 70

Query: 67  VMDAAQA------DRFDPND-LEGYAGRTYDLLVERPRLWRLLTWHHLERGQDVLMLPAG 119
                QA      D  DP   L       +D  V  P    +L   +L +G         
Sbjct: 71  YASFNQAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQGLHARKSQNL 130

Query: 120 EVLLGEKLDG----IAAAQAEGRIVADFTPLDVVRLVAAL 155
             L GE +      I A QA+G    D        ++A+L
Sbjct: 131 RALSGEAVGVLRPIIEAGQAKGLFRDDICITHAYLMIASL 170