Pairwise Alignments

Query, 347 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 693 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  242 bits (617), Expect = 2e-68
 Identities = 134/307 (43%), Positives = 180/307 (58%), Gaps = 4/307 (1%)

Query: 29  LSQPIDLDAVTIFPGASLGVAIFPTDGTTREQIVNNADLAMYRAKDTVGRQTCYYEQSMD 88
           L  P DLD   I   A++G+ +FP DG + E+++  A+  M  AK     +  +Y  S+D
Sbjct: 367 LEVPFDLDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKARSRNRYQFYIASVD 426

Query: 89  DIARARRMIANDLREAIGRGELSLAYQVQKDVATEEVSGYEALLRWHHPRDGWISPAEFI 148
              R RR +  DLREA+ R +L L YQ Q       V G EALLRW HP  G + P +FI
Sbjct: 427 SEMRRRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPELGMVPPDQFI 486

Query: 149 PIAEESGEIVRIGEWVLRHACAEAARWP----KPWRIAVNLSPVQLMHVDLIQAVTSALL 204
           P+AE++G I+ IGEWVL  AC +   W        R+AVNLS VQL H +L + V + L 
Sbjct: 487 PLAEQNGSIISIGEWVLDQACRQLREWHDQGFSDLRMAVNLSTVQLHHSELPRVVNNLLQ 546

Query: 205 ESGLPASRLELEITETAFIADKVRALHVLRQIKALGVSIAIDDFGTGYSSLDTLNSFPFD 264
              LP   LELE+TET  + D   A   L  ++  G  IAIDDFGTGYSSL  L S P D
Sbjct: 547 AYRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLD 606

Query: 265 KIKIDKSFLLESETSHQARAIIRAVLALGRSLEVPVLAEGLESEEQLRLLRSEGCDEAQG 324
           KIKIDKSF+ +         I+RA++ LG+SL + V+AEG+E+ EQ   + ++GC E QG
Sbjct: 607 KIKIDKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIVAQGCHEGQG 666

Query: 325 YLWGRPV 331
           Y + +P+
Sbjct: 667 YHYSKPL 673