Pairwise Alignments

Query, 1031 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1052 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

 Score =  786 bits (2031), Expect = 0.0
 Identities = 430/1031 (41%), Positives = 630/1031 (61%), Gaps = 25/1031 (2%)

Query: 7    GINLSRWALTHQQMVGFLLVLAAVAGLFSYMALGRKEDPEFTVKTMMITVGWPGATAQQM 66
            G NLS+WAL H  +  +L+V+  V G F+Y  LG+ EDP FT + M++   WPGATAQQ+
Sbjct: 14   GFNLSKWALDHAPLTRYLMVVLMVLGAFAYFQLGQDEDPPFTFRAMVVKTYWPGATAQQV 73

Query: 67   SQQVIKPIETVLTENIAEIDYVKSKARPGQATLNVTLISTVKSSAVPDIWYRIRKTVTDN 126
            ++QV   +E  L E     D ++S ++PG++ +   +  + KS+ V ++WY +RK + D 
Sbjct: 74   AEQVTDKLERTLQE-APYADKIRSYSKPGESQIIFNIKDSSKSTEVANVWYTVRKKIGDM 132

Query: 127  RADLPNGVVGPAFNDEFGTTYGNIYAVTGDGFSYPVLKRYAETLRDRIQALPDVAKTQII 186
            RA LP GV GP FND+FG  YG IYA+  +GFSY  LK  A+ +R ++  + DVAK    
Sbjct: 133  RATLPAGVQGPFFNDDFGDVYGVIYALESEGFSYAELKTLADDVRQQLLRVKDVAKVDQF 192

Query: 187  GAQDEAIYVTYDSARLAMSGISAQAIADALDTTNAVAASGIVEAGAERVRMQVTGDFASV 246
            G QDE +Y+     RLA  G+   A+   L + NAV ++G + +  + V+++V G F SV
Sbjct: 193  GVQDEKVYIEISQKRLAQLGLDFNAVLQQLGSQNAVESAGSISSPQDVVQVRVAGQFTSV 252

Query: 247  EAIAATPIV-ANGKSVRLDAIAKVERKPVHPATFRMRFGAKDAVGVGISLRSDGDVARLG 305
            + +   PI  ++G  ++L  IA + R  V P   ++    K+ + +G+S+   GD+  LG
Sbjct: 253  DQLRDMPIRGSSGSQIKLGDIADIHRGYVDPPAVKVHHQGKEVIALGVSMAKGGDIIALG 312

Query: 306  EDLKHTIAALQSEMPVGVDIHTVSDQTRVVDESVGEFTTSLIEAIVIVLAVNFLSLG--- 362
            + LK T A +   +P GV +  V DQ   V  SV EF   LIEA+ IVLAV+ +SLG   
Sbjct: 313  KALKATTATIDKRLPAGVKLAQVQDQPVSVASSVNEFVGVLIEAVAIVLAVSIISLGLHK 372

Query: 363  -----W----RPGIVVALCIPLVLAMTFVCMLYVGIDLQRISLGALIIALGLLVDDAIIV 413
                 W    RPG+VVA+ IPLVLA+TF+ M Y GI L +ISLG+LIIALGLLVDDAII 
Sbjct: 373  GGRFGWYIDMRPGLVVAITIPLVLAVTFLAMNYFGIGLHKISLGSLIIALGLLVDDAIIA 432

Query: 414  VEAVATHLEAGWTRTRAAVSAYSVTAVPMLVGTLITVAGFLPIAMSKATASEYVISLFQV 473
            VE +   +E G+ + RAA  AY VTA PML GTLIT AGFLPI ++K+   EY  ++F V
Sbjct: 433  VEMMVRKMEEGYDKARAATYAYDVTAKPMLTGTLITAAGFLPIGLAKSVTGEYTFAIFAV 492

Query: 474  IAISLILSWVVAVIFTPFIAYHLLPQRADARDDAGEPEEQYEGRFYGWFRRMLDRCLDRR 533
              I+L+LSW+V+V F P++   LL  +  A D    P E ++  FY  FRR ++ C++ R
Sbjct: 493  TVIALVLSWIVSVYFVPYLGTLLL--KVKAHDPDAPPHEMFDSAFYNAFRRAVNWCVEHR 550

Query: 534  KTVVAVALAMFVGSMLLFQIG-VPRQFFPASDRPELVVDLQLSQNASFAQTQAVAARMEQ 592
               +   + +F  ++ +  +G V +QFFP S RPE++VD+   +  SFA  + VA R+E+
Sbjct: 551  WATIGATVLIF--ALGIVGMGKVQQQFFPDSSRPEILVDIWFPEGTSFAANEEVAKRVEK 608

Query: 593  LLARDDRVVSTTAYLGGGSPRFYLPLNVQTPDITLAELVLQTRDEEAREGVIASIQSLFA 652
                +  V + + ++G G PRFYLPL+   P   +++L++  +D + RE +   +  L A
Sbjct: 609  RFMEEAGVSTVSTWIGSGVPRFYLPLDQVFPQTNVSQLIVLAKDLKVRETLRLKLPQLLA 668

Query: 653  THFPEARGRVSRLENGPSVGQPVQYRVAGPDLTQIMPVAKRLEELIRADSHARDVNSDLG 712
              FPE RGRV  L NGP V  PVQ+RV GPD   +   A  ++ ++R + + R VN +  
Sbjct: 669  QEFPEVRGRVKLLPNGPPVAYPVQFRVIGPDPALLRGHADEVKAVLRDNPNMRGVNDNWN 728

Query: 713  EPLKAIRVDLDQDKVRALGLSTQAVQQSLQAAIGGAGTTSFRDRDLALEVVLRLSAAERT 772
            E +K IR+++DQ K RALG+++QA+ Q+ +    G     +R+ DL +++VLR +  ER 
Sbjct: 729  ESVKVIRLEVDQAKARALGVTSQAIAQASKTMFSGTTVGQYRENDLLIDIVLRQAPDERQ 788

Query: 773  DLGRIANLPISTPNG-AVPLAQLGHVSAGSEPAVIYQRNRQPTITISADV-EGEQASDLT 830
             +  I N  I T +G ++PL Q+       EP V+++ NR   IT+  DV EG Q + +T
Sbjct: 789  AISDIGNAYIPTSSGRSIPLTQIAKPVFTWEPGVMWRENRDYAITVQGDVIEGLQGATVT 848

Query: 831  KRIEPQIEALRRDLPS----GASIVKGGSEEQSSINQKATMAAVPFAIFVIVILLMLQLQ 886
             ++ P++  L     +    G  +   G+ E+SS    + +A VP  +F++  LLMLQL 
Sbjct: 849  TQLLPKLRELEAGWAAAGQGGYRVEVAGAAEESSKGSASIVAGVPIMLFLVFTLLMLQLH 908

Query: 887  NVKRMLVVLATGPLALIGVALIMALFRIPFGFVAMLGSLALFGMVLRNSVILIAQIDTLS 946
            +  R L+V  TGP+ + GVA  + +   PFGFVA+LG +AL GM+ RN+VILI QI+   
Sbjct: 909  SFSRSLLVFITGPMGIAGVAGALLVLNRPFGFVALLGVIALMGMIQRNAVILIDQIEIDR 968

Query: 947  GHGLAMREAVREAAVHRLRPILLTALAAILAMIPLTRSTFWGPMAWAIMGGLMVATILTL 1006
              G+   +A+ E+AV RLRPI+LTA AA+LAMIPL+RS FWGPMA AIMGGL+VAT+LTL
Sbjct: 969  AAGVPAWDAIVESAVRRLRPIVLTAAAAVLAMIPLSRSVFWGPMAVAIMGGLIVATVLTL 1028

Query: 1007 IVLPALYELVF 1017
            + LPA+Y   F
Sbjct: 1029 LALPAMYAAAF 1039