Pairwise Alignments

Query, 1031 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1053 a.a., cation efflux system protein from Pseudomonas putida KT2440

 Score =  281 bits (720), Expect = 1e-79
 Identities = 266/1077 (24%), Positives = 488/1077 (45%), Gaps = 88/1077 (8%)

Query: 12   RWALTHQQMVGFLLVLAAVAGLFSYMALGRKEDPEFTVKTMMITVGWPGATAQQMSQQVI 71
            R+A+  + +V   +++ A  G++SY  L     P+ T   + I    PG +  +  Q++ 
Sbjct: 7    RFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLETEQRIT 66

Query: 72   KPIETVLTENIAEIDYVKSKARPGQATLNVTLISTVKSSAVPDIWYR---IRKTVTDNRA 128
             P+ET +   +  +   +S +R G + + V            DI++    I + +   + 
Sbjct: 67   FPVETAMA-GLPGLQQTRSLSRSGLSQVTVIFKDGT------DIFFARQLINERLQVAKE 119

Query: 129  DLPNGVVGPAFNDEFGTTYGNIY---------AVTGDGFSY-PVLKRYAET--LRDRIQA 176
             LP GV   A      T  G I+         AV  DG  Y P   R  +   ++ +++ 
Sbjct: 120  QLPEGV--EAVMGPVSTGLGEIFLWTVEAEDGAVKEDGTPYTPTDLRVIQDWIIKPQLRN 177

Query: 177  LPDVAKTQIIGAQDEAIYVTYDSARLAMSGISAQAIADALDTTNAVAASGIVEAGAERVR 236
            +P VA+   IG   +   V  D  RLA   ++   +  AL++ NA   +G +E   E++ 
Sbjct: 178  VPGVAEINTIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIERNGEQLL 237

Query: 237  MQVTGDFASVEAIAATPIVA-NGKSVRLDAIAKVERKPVHPATFRMRFGAKDAVG----V 291
            ++  G   ++E IA   I + +G  +R+ ++A V           +R GA    G    +
Sbjct: 238  IRAPGQVGNIEDIANIVITSVDGAPIRISSVADVSIGK------ELRTGAATENGREVVL 291

Query: 292  GISLRSDGDVAR-LGEDLKHTIAALQSEMPVGVDIHTVSDQTRVVDESVGEFTTSLIEAI 350
            G      G+ +R + + +   +A +   +P GV   TV D+T +V++++     +L+E  
Sbjct: 292  GTVFMLIGENSRTVSQAVAAKLADINRTLPKGVVAVTVYDRTNLVEKAIATVKKNLVEGA 351

Query: 351  VIVLAVNFLSLG-WRPGIVVALCIPLVLAMTFVCMLYVGIDLQRISLGALIIALGLLVDD 409
            ++V+A+ FL LG  R  ++ A+ IPL +  TF  M    +    +SLGAL    G++VD 
Sbjct: 352  ILVIAILFLFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLGAL--DFGIIVDG 409

Query: 410  AIIVVE------AVATHLEAGWT----RTRAAVSAYSVTAVPMLVGTLITVAGFLPIAMS 459
            A+++VE      A A H          R     +A      P++ G LI +  +LPI   
Sbjct: 410  AVVIVENAIRRLAHAQHKHGRMLTKTERFHEVFAAAREARRPLIFGQLIIMVVYLPIFAL 469

Query: 460  KATASEYVISLFQVIAISLILSWVVAVIFTPFIAYHLLPQRADARDDAGEPEEQYEGRFY 519
                 +    +   + ++L+ + V++V F P      +  +   +++ G        R+ 
Sbjct: 470  TGVEGKMFHPMAFTVVMALLGAMVLSVTFVPAAIAMFVTGKV--KEEEGVVMRTARLRY- 526

Query: 520  GWFRRMLDRCLDRRKTVVAVALAMFVGSMLLFQIGVPRQFFPASDRPELVVDLQLSQNAS 579
                 +L   L  R    + A+A+ V S LL    +  +F P+    +  +        S
Sbjct: 527  ---EPVLQWVLGHRNIAFSAAVALVVLSGLLAS-RMGSEFIPSLSEGDFAMQAMRVPGTS 582

Query: 580  FAQTQAVAARMEQ-LLARDDRVVSTTAYLGGGSPRFYLPLNVQTPDITLAELVLQTRDE- 637
              Q+  +  R+E+ ++A+   V    A  G       +  +   P+ + A ++L+ +D+ 
Sbjct: 583  LTQSVEMQQRLEKAVIAQVPEVERMFARSGTAE----IASDPMPPNASDAYIMLKPQDQW 638

Query: 638  ----EAREGVIASIQSLFATHFPEARGRVSRL------ENGPSVGQPVQYRVAGPDLTQI 687
                + R+ +IA +Q   A   P +   +S+       E    V   V  +V G D+  +
Sbjct: 639  PNPKKPRDELIAEVQKA-AAGVPGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMDVL 697

Query: 688  MPVAKRLEELIRADSHARDVNSDLGEPLKAIRVDLDQDKVRALGLSTQAVQQSLQAAIGG 747
               A ++   ++A   + +V  +    L  + +++D++K    GL+   VQ S+  A+GG
Sbjct: 698  NNTANKIAAALKAVPGSSEVKVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAVGG 757

Query: 748  AGTTSFRDRDLALEVVLRLSAAERTDLGRIANLPISTPNGA---------VPLAQLGHVS 798
                +  + D   ++V+RL    RTD+  +++L I  P  A         +PL+Q+ ++ 
Sbjct: 758  RQAGTLYEGDRRFDMVVRLPETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVANLD 817

Query: 799  AGSEPAVIYQRNRQPTITISADVEGEQASDLTKRIEPQIEALRRDLPSGASIVKGGSEEQ 858
                P  I + N +  + +SA+V G       +     ++  +  +P+G     GG  EQ
Sbjct: 818  LQLGPNQISRENGKRLVIVSANVRGRDLGSFVEEATASLDK-KVQIPAGYWTTWGGQFEQ 876

Query: 859  SSINQKATMAAVPFAIFVIVILLMLQLQNVKRMLVVLATGPLALIGVALIMALFRIPFGF 918
                 K     VP A+ +++ LL L   N+K  ++V    P AL G  + + L  IP   
Sbjct: 877  LQSAAKRLQIVVPVALLLVMTLLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLSI 936

Query: 919  VAMLGSLALFGMVLRNSVILIAQIDTLSGHGLAMREAVREAAVHRLRPILLTALAAILAM 978
             A +G +AL G+ + N +++IA I  L   G  +R+AV E A+ RLRP+L+TAL A L  
Sbjct: 937  SAGVGFIALSGVAVLNGLVMIAFIRGLREEGRTLRQAVDEGALTRLRPVLMTALVASLGF 996

Query: 979  IPLTRSTFWG-----PMAWAIMGGLMVATILTLIVLPALYELVFDRPQHRADSQEIS 1030
            IP+  +T  G     P+A  ++GG++ +T LTL+VLPALY     + +   +++ +S
Sbjct: 997  IPMALATGTGAEVQRPLATVVIGGILSSTALTLLVLPALYHWAHRKDEDGDEAEVVS 1053