Pairwise Alignments

Query, 1031 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1021 a.a., Multidrug export protein AcrF from Pseudomonas lactucae CFBP13502

 Score =  880 bits (2275), Expect = 0.0
 Identities = 469/1015 (46%), Positives = 674/1015 (66%), Gaps = 6/1015 (0%)

Query: 7    GINLSRWALTHQQMVGFLLVLAAVAGLFSYMALGRKEDPEFTVKTMMITVGWPGATAQQM 66
            G NLS WAL ++Q+V FL++L AV G  SY  LG+ EDP FT K M++   WPGATAQ++
Sbjct: 2    GFNLSEWALRNRQIVLFLMILLAVVGTLSYTKLGQSEDPPFTFKAMVVKTNWPGATAQEV 61

Query: 67   SQQVIKPIETVLTENIAEIDYVKSKARPGQATLNVTLISTVKSSAVPDIWYRIRKTVTDN 126
            S+QV + IE  L E   E + + S +RPG++ +      ++ S+ +P++WY++RK ++D 
Sbjct: 62   SRQVTERIEKKLMET-GEYERIVSFSRPGESQVTFIARDSMHSAQIPELWYQVRKKISDI 120

Query: 127  RADLPNGVVGPAFNDEFGTTYGNIYAVTGDGFSYPVLKRYAETLRDRIQALPDVAKTQII 186
            R  LP  + GP FNDEFGTT+GNIYA+TGDGF Y VLK YA+ ++ ++Q +PDV K +++
Sbjct: 121  RQTLPPDIQGPFFNDEFGTTFGNIYALTGDGFDYAVLKDYADRIQIQLQRVPDVGKVELL 180

Query: 187  GAQDEAIYVTYDSARLAMSGISAQAIADALDTTNAVAASGIVEAGAERVRMQVTGDFASV 246
            G QDE I++   + +LA  G+   A+  AL   NAV+ +G  E  +ERV+++V+G+F +V
Sbjct: 181  GLQDEKIWIELSNLKLATLGLPLAAVQQALQEQNAVSTAGFFETPSERVQLRVSGNFKTV 240

Query: 247  EAIAATPIVANGKSVRLDAIAKVERKPVHPATFRMRFGAKDAVGVGISLRSDGDVARLGE 306
            E I   PI    ++ R+  +A++ R    P   RMR+   DA+G+ +++R  GD+  LG+
Sbjct: 241  EEIRNFPIRVGDRTFRIGDVAEIHRGFNDPPAPRMRYMGADAIGLAVAMRDGGDILVLGK 300

Query: 307  DLKHTIAALQSEMPVGVDIHTVSDQTRVVDESVGEFTTSLIEAIVIVLAVNFLSLGWRPG 366
             L+   A LQ  +P G+++  VSDQ   V  SVGEF   L EA+ IVL V+F SLG R G
Sbjct: 301  ALEGEFARLQKNLPAGMELRKVSDQPAAVKTSVGEFVQVLAEALAIVLLVSFFSLGVRTG 360

Query: 367  IVVALCIPLVLAMTFVCMLYVGIDLQRISLGALIIALGLLVDDAIIVVEAVATHLEAGWT 426
            +VVAL IPLVLAMTF  M Y+GI L +ISLGAL++ALGLLVDDAII VE +A  +E G+ 
Sbjct: 361  MVVALAIPLVLAMTFATMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYD 420

Query: 427  RTRAAVSAYSVTAVPMLVGTLITVAGFLPIAMSKATASEYVISLFQVIAISLILSWVVAV 486
            R +AA  A++ TA PML GTLIT AGFLPIA ++++  EY  S+FQV+ I+L+ SWV AV
Sbjct: 421  RLKAASFAWTSTAFPMLTGTLITAAGFLPIATAQSSTGEYTRSIFQVVTIALLASWVAAV 480

Query: 487  IFTPFIAYHLLPQRA--DARDDAGEPEEQYEGRFYGWFRRMLDRCLDRRKTVVAVALAMF 544
            +F P++   LLP  A   A     +  + Y   FY   RR+++ C+ RRKTV+ + L +F
Sbjct: 481  VFVPYLGEKLLPDLAKIHAAKHGTDGPDPYGTPFYQRVRRLVEWCVRRRKTVIVLTLLLF 540

Query: 545  VGSMLLFQIGVPRQFFPASDRPELVVDLQLSQNASFAQTQAVAARMEQLLARDDRVVSTT 604
            +GS+ LF+  VP+QFFPAS R EL+VDL+L++ AS + T     R+E LL     + +  
Sbjct: 541  IGSVALFRF-VPQQFFPASGRLELMVDLKLAEGASLSNTADQVKRLEGLLKTHAGIDNYV 599

Query: 605  AYLGGGSPRFYLPLNVQTPDITLAELVLQTRDEEAREGVIASIQSLFATHFPEARGRVSR 664
            AY+G GSPRFYLPL+ Q P  + A+ V+  +  E RE +   +       FP+ R RV+R
Sbjct: 600  AYVGTGSPRFYLPLDQQLPAASFAQFVVLAKTIEERESLRLWLIETLNEQFPDLRARVTR 659

Query: 665  LENGPSVGQPVQYRVAGPDLTQIMPVAKRLEELIRADSHARDVNSDLGEPLKAIRVDLDQ 724
            LENGP VG PVQ+RV G  + ++  +A+++   +R ++H  +V+ D  EP K + +++DQ
Sbjct: 660  LENGPPVGYPVQFRVTGEHIEEVRALARKVAAKVRENTHVANVHLDWEEPSKIVYLNIDQ 719

Query: 725  DKVRALGLSTQAVQQSLQAAIGGAGTTSFRDRDLALEVVLRLSAAERTDLGRIANLPIST 784
            D+ RALG+ST  + + LQ+++ G+  + FR+ +  +E++LR +  ERT+L  + +L + T
Sbjct: 720  DRARALGVSTANLSKFLQSSLTGSSVSQFREDNELIEILLRGTVHERTELSLLPSLAVPT 779

Query: 785  PNG-AVPLAQLGHVSAGSEPAVIYQRNRQPTITISADVEG-EQASDLTKRIEPQIEALRR 842
             NG +V L+Q+  +  G E  VI+ RNR PT+T+ AD+ G EQ + L ++I P +  +R 
Sbjct: 780  DNGKSVALSQIATLEYGFEEGVIWHRNRLPTVTVRADIYGKEQPATLVQQILPTLADVRA 839

Query: 843  DLPSGASIVKGGSEEQSSINQKATMAAVPFAIFVIVILLMLQLQNVKRMLVVLATGPLAL 902
            +LP G  +  GG+ E S+  Q +  A VP  I V++ LLM+QL++  R  +V  T PL L
Sbjct: 840  ELPDGYLLEVGGTVEDSARGQNSVKAGVPLFIVVVLTLLMVQLRSFSRSAMVFLTAPLGL 899

Query: 903  IGVALIMALFRIPFGFVAMLGSLALFGMVLRNSVILIAQIDTLSGHGLAMREAVREAAVH 962
            IGV L + +FR PFGFVAMLG++AL GM++RNSVIL+ QI+     GLA  +A+ EA V 
Sbjct: 900  IGVTLFLLVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIKAGLAPWQAIIEATVR 959

Query: 963  RLRPILLTALAAILAMIPLTRSTFWGPMAWAIMGGLMVATILTLIVLPALYELVF 1017
            R RPI+LTALAA+LAMIPL+RS F+GPMA AIMGGL+VAT LTL+ LPALY   F
Sbjct: 960  RFRPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYAAWF 1014