Pairwise Alignments

Query, 357 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 356 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  172 bits (436), Expect = 1e-47
 Identities = 117/342 (34%), Positives = 166/342 (48%), Gaps = 2/342 (0%)

Query: 11  ALLLLPACRDEPQVRDERRAVAVQRIGA-DAGTSTSYAGEIRSAFESQIGFEVAGRIVER 69
           A LLL AC  E    +  R V    + A D      +AG I++ +ES +GF V GRI  R
Sbjct: 10  ASLLLVACSKEDAPPEPVRPVLSMEVKAEDQENLGRFAGTIQARYESNLGFRVPGRIARR 69

Query: 70  RVDLGSSVHAGQTLLRLDNSDYARALDSAAAQSSSARTAAAVQQADLARSRELLKQGFIS 129
            VD+G+ V  G  L  LD +D    L SA    +  +      QA+  R +EL  +G  +
Sbjct: 70  VVDVGAEVEKGALLAVLDPTDQQNQLRSAQGDLARVQAQYINAQANARRQQELFNRGVGA 129

Query: 130 PAEFDQQKAAAIQAQAQLRAAGAQSGTASAQLSRTVLTAPRAGVVTQIQGEVGQVVGAGQ 189
            A+ D  +      QA L  A A    A+ QL    L    AG+VT    E GQVV AGQ
Sbjct: 130 QAQLDIAQTDLKTTQATLDQAKASVNQANDQLRYAELRTDHAGIVTAWNAEAGQVVSAGQ 189

Query: 190 TIVTLADPSRPEIAVALPEGSLDRIRSASRLSVSVWSSPGRRYAARLRSISGAADPATRT 249
            +VTLA P   E  + LP G  +R+       V+    P     A +R I   A  ATRT
Sbjct: 190 QVVTLARPDIKEAVIDLPAGLAERLPPDVVFLVAGQLDPSVNTTAIVREIEPQAQSATRT 249

Query: 250 FAARLSVDAPAQALLMGETAELRVEGAAGDAAVRVPLTAVLQSNGRAQAWVLDRRTMVVQ 309
             ARL++     A  +G    + +  A     + VPL+A+ + +G+ + W+LD  +  VQ
Sbjct: 250 RRARLTLTETPPAFRLGTAISVTLSTAIA-PRIEVPLSALQEVDGKTRIWLLDTHSQTVQ 308

Query: 310 PRAVQIGAAQGDMLTIRSGLKPGETIVTAGVHLLRAGEKVRI 351
            R + + +   D   +  G+KPGE IV AGV+ L+ G+KV+I
Sbjct: 309 TRDISVISRDADSALLNDGVKPGERIVIAGVNSLKPGQKVKI 350