Pairwise Alignments

Query, 357 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 355 a.a., Efflux membrane fusion protein, RND family from Pseudomonas putida KT2440

 Score =  170 bits (430), Expect = 6e-47
 Identities = 108/340 (31%), Positives = 168/340 (49%), Gaps = 2/340 (0%)

Query: 11  ALLLLPACRDEPQVRDERRAVAVQRIGADAGTSTS-YAGEIRSAFESQIGFEVAGRIVER 69
           A +LL  C  E +  +  R V   ++     +    +AG I++ FES +GF V+GRI  R
Sbjct: 10  AAVLLVGCTSEEEAPEVIRPVLSVKVEPQVQSQLGRFAGSIQARFESTLGFRVSGRIARR 69

Query: 70  RVDLGSSVHAGQTLLRLDNSDYARALDSAAAQSSSARTAAAVQQADLARSRELLKQGFIS 129
            +D+G+ V  G TL  LD +D    L +A    +  +      QAD  R ++L  +G  +
Sbjct: 70  WLDVGAQVKPGDTLATLDPTDQQNQLRAAEGDLAKVQAQWINAQADARRQQQLYDRGVGA 129

Query: 130 PAEFDQQKAAAIQAQAQLRAAGAQSGTASAQLSRTVLTAPRAGVVTQIQGEVGQVVGAGQ 189
            A+ D  +       A L  A +    A  QL  + L A  A V+T  Q E GQ V AGQ
Sbjct: 130 QAQLDIAQTNLKTTSAALEQARSAVSQARDQLDYSTLRADHAAVITAWQAEAGQTVTAGQ 189

Query: 190 TIVTLADPSRPEIAVALPEGSLDRIRSASRLSVSVWSSPGRRYAARLRSISGAADPATRT 249
            +VTLA P   E  + LP G  +++      +V+    P     A LR +   AD  TRT
Sbjct: 190 AVVTLARPDVKEAVIDLPIGLAEQLSKGLTFTVASQLDPTINTTASLRELEPQADATTRT 249

Query: 250 FAARLSVDAPAQALLMGETAELRVEGAAGDAAVRVPLTAVLQSNGRAQAWVLDRRTMVVQ 309
             ARL++ +   A  +G    + +       +  +PL+A+L+ +G+ Q WV+D +   V 
Sbjct: 250 RRARLTLASTPAAFHLGTAISVTLSSEVSPRS-ELPLSALLERDGKTQVWVIDTQNKTVA 308

Query: 310 PRAVQIGAAQGDMLTIRSGLKPGETIVTAGVHLLRAGEKV 349
            R V +     D + + +G++PGE +VTAGV+ L+ G+KV
Sbjct: 309 TRDVALIDRTADSIVLSAGVQPGERVVTAGVNSLKPGQKV 348