Pairwise Alignments

Query, 357 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  101 bits (251), Expect = 4e-26
 Identities = 89/322 (27%), Positives = 134/322 (41%), Gaps = 13/322 (4%)

Query: 48  GEIRSAFESQIGFEVAGRIVERRVDLGSSVHAGQTLLRLDNSDYARALDSAAAQSSSART 107
           G + +     +   VAG +V+     G  V AG  L  +D   Y  AL  A    +  + 
Sbjct: 85  GTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQNQA 144

Query: 108 AAAVQQADLARSRELLKQGFISPAEFDQQKAAAIQAQAQLRAAGAQSGTASAQLSRTVLT 167
                Q DLAR + L  +  I+    D  +A   Q Q  ++   AQ   A   L  T + 
Sbjct: 145 QLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFTQIR 204

Query: 168 APRAGVVTQIQGEVGQVVGAGQT--IVTLADPSRPEIAVALPEGSL----DRIRSASRLS 221
           AP +G V   Q ++G +V A  T  +V +       +A  LPE  L    +R RS + L 
Sbjct: 205 APISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLPETELSTVLERYRSGASLP 264

Query: 222 VSVWSSPGRRYAAR--LRSISGAADPATRTFAARLSVDAPAQALLMGETAELRVEGAAGD 279
           V  W     +  +   L SI    D  T T   +   +    AL   +   +R+      
Sbjct: 265 VEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALFPNQFVNVRLLADTLK 324

Query: 280 AAVRVPLTAVLQSNGRAQAWVLDRRTMVVQPRAVQIGAAQGDMLTIRSGLKPGETIVTAG 339
             V  P  A+   N    A+V++ ++  V  R +++GA+ G+   I  GLK G+ +V  G
Sbjct: 325 QVVMAPAAAIQFGNDGTFAYVVNEQS-TVNVRKLKVGASDGENSVILDGLKAGDRLVLEG 383

Query: 340 VHLLRAGEKVRIV----QVPQS 357
              LR G KV +V    QVP S
Sbjct: 384 TDRLREGTKVEVVEDSSQVPTS 405