Pairwise Alignments

Query, 357 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 85/321 (26%), Positives = 135/321 (42%), Gaps = 29/321 (9%)

Query: 48  GEIRSAFESQIGFEVAGRIVERRVDLGSSVHAGQTLLRLDNSDYARALDSAAAQSSSART 107
           G +++     +  EV G +     D G  V AGQ LL+L++      L +A A    A+ 
Sbjct: 83  GSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDDQETALLGTALADLGLAKV 142

Query: 108 AAAVQQADLARSRELLKQGFISPAEFDQQKAAAIQAQAQLRAAGAQSGTASAQLSRTVLT 167
                  D  R  +L+    IS  EFD+         +Q R   A      AQ  +  + 
Sbjct: 143 -------DFGRGSQLVGDSAISRGEFDR-------LSSQYRRNQAVVEQLKAQKIKKRIN 188

Query: 168 APRAGVVTQIQGEVGQVVGAGQTIVTLADPSRPEIAVALPEGSLDRIRSASRLSVSVWSS 227
           AP +G +   Q ++GQ + AG  I TL D S   +   +PE +L  +    ++ V V + 
Sbjct: 189 APFSGTIGIRQVDIGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVAAY 248

Query: 228 PGRRYAARLRSISGAADPATRTFAARLSVDAPAQALLMGETAELRVEGAAGDAAVRVPLT 287
           PG+R+   L +I+   +  TR    R ++  P   LL G  A L +        V VP +
Sbjct: 249 PGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQVVVPES 308

Query: 288 AVLQSNGRAQAWVLDRR---------------TMVVQPRAVQIGAAQGDMLTIRSGLKPG 332
           A+  +      +V   R                +V + R V+ G  +  ++ +  GL+ G
Sbjct: 309 AITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEGLQAG 368

Query: 333 ETIVTAGVHLLRAGEKVRIVQ 353
           E +VTAG   L  G  +RI Q
Sbjct: 369 EQVVTAGQLKLTPGAAIRIGQ 389