Pairwise Alignments

Query, 283 a.a., RepA from Sphingobium sp. HT1-2

Subject, 288 a.a., Plasmid replication initiator protein from Variovorax sp. SCN45

 Score =  105 bits (263), Expect = 9e-28
 Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 15/239 (6%)

Query: 20  RGDRSLMAFPFFALSKGKWTKPLAYDNGTVSIEIVPTAK-GAATIYDKEIVLYIASLMIA 78
           R  + LMAFPFF+L+K + T P+ +  G V+I +  T + G ATI+D +++++ AS ++ 
Sbjct: 32  RDSQDLMAFPFFSLAKSRRTAPIDFRAGNVTIRVEGTQEHGIATIWDADVLIWAASQIVE 91

Query: 79  RLEAGEEVAQEFHFTAHDLFCVTGNNPSARSYSRLSQALERLQGTQIKTNIEAGGEGEEG 138
             +AG   ++    T +++    G   S R Y RL  AL+RLQ T + T+I         
Sbjct: 92  ARDAGLRPSRLMQATPYEILRFIGRGTSLRDYQRLKAALDRLQSTTVATSIRETTGRRLH 151

Query: 139 YFSWLSEAKLYYTRNKDAQSDVRRLKAIRVRLCDWLYRAILHDRQILNYANGYFQL-GPV 197
            FSW++E K       DA+     ++ I   L DW Y  +L    +L     YF+L G +
Sbjct: 152 RFSWINEWK----ELADARGTPLGIELI---LPDWFYAGVLDAALVLTIDPAYFRLTGGI 204

Query: 198 ERRLYEIARSTCATGPHE----MDLDELRRQLGYQNSLPHFRHALKAIAEADAIPDYRL 252
           ER LY + R     G  E     D   L R+ G       F   L+A+    ++P YRL
Sbjct: 205 ERWLYRLVRK--HGGRQESGWWFDFRALHRKSGSTAKPADFACDLRALVARQSLPGYRL 261