Pairwise Alignments

Query, 283 a.a., RepA from Sphingobium sp. HT1-2

Subject, 376 a.a., Plasmid replication initiator protein from Sphingobium sp. HT1-2

 Score =  120 bits (301), Expect = 5e-32
 Identities = 87/269 (32%), Positives = 128/269 (47%), Gaps = 17/269 (6%)

Query: 5   QRDLFIMDSPLLADVRGDRSLMAFPFFALSKGKWTKPLAYDNGTVSIEIVPTAK---GAA 61
           Q DLF+     L  +R  R  M  PFF+LSK K  KP+ Y +    + +  +A    G A
Sbjct: 12  QVDLFLPQLTTLP-MRDQRETMERPFFSLSKRKRLKPIDYVSPDRKVTVHVSANSEYGLA 70

Query: 62  TIYDKEIVLYIASLMIARLEAG-EEVAQEFHFTAHDLFCVTGNNPSARSYSRLSQALERL 120
           TIYD +I++Y AS++I     G  ++ Q  H   +D+      +   RSY  L  AL+RL
Sbjct: 71  TIYDLDILIYCASVLIEHKRRGANDIPQTLHIVPYDMLTTLKRDAGGRSYELLGNALDRL 130

Query: 121 QGTQIKTNIEAGGEGEEGYFSWLSEAKLYYTRNKDAQSDVRRLKAIRVRLCDWLYRAILH 180
           Q T +KTNI + G+  E  FSW+      Y++ KD    VR    +R+ L  W Y  +L 
Sbjct: 131 QSTTVKTNIRS-GDAVETTFSWIDS----YSQLKDRNGQVR---GMRITLAKWFYDGVLM 182

Query: 181 DRQILNYANGYFQL-GPVERRLYEIARSTC-ATGP--HEMDLDELRRQLGYQNSLPHFRH 236
           +  +L     YF L G  ER LY +AR      GP    + +  L  + G +     F+ 
Sbjct: 183 EGGVLAIDPAYFSLTGGRERWLYRVARKHAGGAGPDGFSISMPTLFEKSGAEGDYRRFKF 242

Query: 237 ALKAIAEADAIPDYRLVLIGAKAASPKSR 265
            +  I   +A+P Y L L+  +   P  R
Sbjct: 243 EMAKIVRENALPGYALDLVHREGTEPMIR 271