Pairwise Alignments

Query, 880 a.a., DNA mismatch repair protein MutS from Sphingobium sp. HT1-2

Subject, 857 a.a., DNA mismatch repair protein MutS from Pseudomonas putida KT2440

 Score =  568 bits (1465), Expect = e-166
 Identities = 353/870 (40%), Positives = 501/870 (57%), Gaps = 29/870 (3%)

Query: 12  TPMMAQYFTLKAEAQDCLLFYRMGDFFELFFDDAKMAAATLDIALTSRGEHAGQPIPMCG 71
           TPMM QY+ LK +  D L+FYRMGDF+E+F++DAK AA  LDI LT+RG+ AGQ IPMCG
Sbjct: 8   TPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCG 67

Query: 72  VPVHSAESYLARLIKGGHRVAIAEQTETPAEAKARGGKALVARAIVRYVTAGTLTEETLL 131
           +P HS E YLA+L+K G  V I EQ   PA +K       V R +VR +T GT+++E LL
Sbjct: 68  IPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGP-----VERQVVRIITPGTVSDEALL 122

Query: 132 DSRRDNMLVALAQTGGEGELGLAAADISTGRFETMTVRAGD-LPAELARLRPSEVVIAEG 190
           D RRDN++ AL   G E   GLA  DI++G F    ++  + L AEL RL P E++I + 
Sbjct: 123 DERRDNLIAALL--GDERLFGLAVLDITSGNFSVQEIKGWENLLAELERLNPVELLIPDD 180

Query: 191 STLEV-ANSHPFDKAA----FSSARAEEALKRLFAVATLDGFG-QFSRAELAAMGGLISY 244
              ++ A   P  +      F    A +AL + FA   L GFG       + A G L++Y
Sbjct: 181 WPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGCLLTY 240

Query: 245 LDHAGKGTMPFLAPPLRKTSGAHVAIDAATRESLEIVATTGGTRAGSLLGAVDRTVTGAG 304
                +  +P L     +     V +D A+R +LE+     G R  +L   +DR  T   
Sbjct: 241 AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQTAMA 300

Query: 305 ARLLAQDLSAPLMDAPLIDARLGLVQLFHDDATLRSQLRAALRALPDIGRALGRVAVGRG 364
           +RLL++ L+ PL D  ++ AR   ++   D      +L+  L+ + DI R L R+ +   
Sbjct: 301 SRLLSRWLNRPLRDLKVLQARQDSIRCLLDSYRFE-KLQPQLKEIGDIERILARIGLRNA 359

Query: 365 SPRDLGQLRDGLGEARLLRERLGRLADQPLLLTQLLPALDGHGALVDALARALVPSPPTE 424
            PRDL +LRD LG    L+  +  L  +   L +L      +  L   L RA++ +PP  
Sbjct: 360 RPRDLARLRDALGALPELQNAMTEL--EAPHLARLAAITGTYPELASLLERAIIDNPPAV 417

Query: 425 TNNGGYIADGFDPALDELRRLAGDGRRAIAALEAQYREQTGISALKIRHNGVLGYHVEVP 484
             +GG +  G+D  LDEL  ++ +  + +  LEA+ + +TG++ LK+ +N V GY +E+P
Sbjct: 418 IRDGGVLKAGYDNELDELLAISENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIELP 477

Query: 485 ARAADQLMQPESGFTHRQTLAGIVRFNSIDLHEQAGRVAQAGAHALVAEAAHLETLIDAV 544
            + A+Q       +  RQTL G  RF + +L     +   A + AL  E    + L++ +
Sbjct: 478 TKQAEQA---PGDYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYDALLETL 534

Query: 545 LDRKADIARAADALARLDVAAALAERAAEGGWQRPLFVVEDGVGPCLDIVGGRHPVVEDA 604
           +   A +  +A ALA LDV + LAERA       P FV E    PCL I  GRHPVVE  
Sbjct: 535 ISHLAPLQDSAAALAELDVLSNLAERALNLDLNCPRFVDE----PCLRIEQGRHPVVEQV 590

Query: 605 LRAQGQPFVANDCRLVATDRLWLVTGPNMGGKSTFLRQNALIVILAQAGAFVPAETATLT 664
           L     PFVAND  L  + R+ ++TGPNMGGKST++RQ ALIV+LA  G+FVPA +  L+
Sbjct: 591 LTT---PFVANDLGLDNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELS 647

Query: 665 LVDRLFSRVGASDNLARGRSTFMVEMVETAAILAQATEHSFVILDEVGRGTSTYDGLALA 724
           LVDR+F+R+G+SD+LA GRSTFMVEM ETA IL  AT+ S V++DEVGRGTST+DGL+LA
Sbjct: 648 LVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLA 707

Query: 725 WAVVEAVHEVNRCRCLFATHHHELTRLSETLDALSLHHVRAREWKGDLVLLHELAEGPAD 784
           WA  E + ++ R   LFATH+ ELT L E+   ++  H+ A E    +V LH +  GPA 
Sbjct: 708 WAAAERLAQL-RAYTLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPAS 766

Query: 785 RSYGLAVARLAGLPPLVLKRAKDVLGRLEAGKAKTGGIAA-GLDDLPLFASVATQAEEVA 843
           +SYGLAVA+LAG+P  V++RA++ LGRLE         AA    D P     +     + 
Sbjct: 767 QSYGLAVAQLAGVPTAVIQRAREHLGRLETTSLPHEQPAAHKAKDAPQVPHQSDLFASLP 826

Query: 844 DPLRDALDGIDADALSPREALDHIYRLKQL 873
            P  + L  +  D ++PR+A++ +Y+LK L
Sbjct: 827 HPAIEKLGKLQLDDMTPRQAIEMLYQLKNL 856