Pairwise Alignments

Query, 880 a.a., DNA mismatch repair protein MutS from Sphingobium sp. HT1-2

Subject, 893 a.a., DNA mismatch repair protein MutS from Azospirillum sp. SherDot2

 Score =  816 bits (2107), Expect = 0.0
 Identities = 463/883 (52%), Positives = 585/883 (66%), Gaps = 30/883 (3%)

Query: 12  TPMMAQYFTLKAEAQDCLLFYRMGDFFELFFDDAKMAAATLDIALTSRGEHAGQPIPMCG 71
           TPMMAQY  +K    DCLLFYRMGDF+E+FF+DA  AAA LDIALT RG+H G+ IPMCG
Sbjct: 14  TPMMAQYLEIKQAHPDCLLFYRMGDFYEMFFEDAVNAAAALDIALTKRGQHLGEDIPMCG 73

Query: 72  VPVHSAESYLARLIKGGHRVAIAEQTETPAEAKARGGKALVARAIVRYVTAGTLTEETLL 131
           VPVHS E+YL RLI+ G RVAI EQ E PAEAK RGGK++V R ++R VT GTLTE++LL
Sbjct: 74  VPVHSHENYLQRLIRQGFRVAICEQMEDPAEAKKRGGKSVVKRGVIRIVTPGTLTEDSLL 133

Query: 132 DSRRDNMLVALAQTGGEGELGLAAADISTGRFETMTVRAGDLPAELARLRPSEVVIAE-- 189
           D+R  N L A+A+T G   LGLA  ++STG      V    L A L RL P EV+I+E  
Sbjct: 134 DARSSNWLAAVAETAGG--LGLAWLEMSTGELVVQPVERTGLGAALGRLDPQEVLISEKL 191

Query: 190 GSTLEVANSHPFDKAA--------FSSARAEEALKRLFAVATLDGFGQFSRAELAAMGGL 241
             T E+       K+         F S   ++ L   + V TLD FG FSRAE+AA G L
Sbjct: 192 SQTPELFELWTDWKSRLTVQPNPRFDSENGKQRLLTQYGVGTLDAFGTFSRAEVAAAGAL 251

Query: 242 ISYLDHAGKGTMPFLAPPLRKTSGAHVAIDAATRESLEIVATTGGTRAGSLLGAVDRTVT 301
           + Y++   KG +P L+PP R   GA + IDA+T  +LE+  T  G R GSLL  +DRTVT
Sbjct: 252 VGYVELTQKGRVPRLSPPRRLGPGAVMEIDASTARNLELTRTLNGERRGSLLATIDRTVT 311

Query: 302 GAGARLLAQDLSAPLMDAPLIDARLGLVQLFHDDATLRSQLRAALRALPDIGRALGRVAV 361
           GAGARLL   L++PL D   I  RL +V+       LR++LR ALR+ PD+ RAL R+ +
Sbjct: 312 GAGARLLCAHLTSPLTDPVAIGRRLDMVEFALTGERLRAELRQALRSCPDLERALSRLTL 371

Query: 362 GRGSPRDLGQLRDGLGEARLLRERLGRLADQPLLLTQLLPALDGHGALVDALARALVPSP 421
           GRG PRDL  +RDGL +A L+RE L      P  L  L   L  H  LVD L +AL P  
Sbjct: 372 GRGGPRDLAAIRDGLRQAGLIRELLAGAMPLPDGLAALDKRLGAHSELVDQLNQALAPEL 431

Query: 422 PTETNNGGYIADGFDPALDELRRLAGDGRRAIAALEAQYREQTGISALKIRHNGVLGYHV 481
           P    +GG+IA  +  ALDEL  L  + RR IA L+ +Y E  G+ +LK++HN VLGYH+
Sbjct: 432 PLLARDGGFIARDYSYALDELVTLRDESRRLIAGLQTKYAEIAGVPSLKVKHNNVLGYHI 491

Query: 482 EVPARAADQLMQPESG--FTHRQTLAGIVRFNSIDLHEQAGRVAQAGAHALVAEAAHLET 539
           EV A  AD+LM  +    F HRQT+A  VRF +++L +   R+++A   AL  E      
Sbjct: 492 EVTAAHADKLMSDKGREVFMHRQTMANAVRFGTVELSDLERRISEAADRALAVELELFAG 551

Query: 540 LIDAVLDRKADIARAADALARLDVAAALAERAAEGGWQRPLFVVEDGVGPCLDIVGGRHP 599
           L++AV  +   IA+AA ALA LDVA +LAE A E  + RPL  V+D +     I GGRHP
Sbjct: 552 LVEAVAGKADAIAQAAHALAALDVATSLAELADERRYSRPL--VDDSLA--FSIAGGRHP 607

Query: 600 VVEDAL-RAQGQPFVANDCRLVATDRLWLVTGPNMGGKSTFLRQNALIVILAQAGAFVPA 658
           VVE  L  A G PFVANDC L   +RLWL+TGPNM GKSTFLRQNALI ILAQ G FVPA
Sbjct: 608 VVEAVLDAAHGGPFVANDCDLAPDNRLWLLTGPNMAGKSTFLRQNALIAILAQMGGFVPA 667

Query: 659 ETATLTLVDRLFSRVGASDNLARGRSTFMVEMVETAAILAQATEHSFVILDEVGRGTSTY 718
           E A + +VDRL+SRVGA+D+LARGRSTFMVEMVETAAIL Q+   + VILDE+GRGT+T+
Sbjct: 668 EQAHIGVVDRLYSRVGAADDLARGRSTFMVEMVETAAILNQSGARALVILDEIGRGTATF 727

Query: 719 DGLALAWAVVEAVHEVNRCRCLFATHHHELTRLSETLDALSLHHVRAREWKGDLVLLHEL 778
           DGL++AWA VE +H++NRCR LFATH+HELT L+  L ALS H +R +EW+GD+V LHE+
Sbjct: 728 DGLSIAWACVEHLHDMNRCRALFATHYHELTMLASKLPALSCHTMRIKEWQGDVVFLHEV 787

Query: 779 AEGPADRSYGLAVARLAGLPPLVLKRAKDVLGRLEAGKAKTGGIAAGLDDLPLF-ASVAT 837
             G ADRSYG+ VA+LAGLPP V+ RA +VL  LE+G  +   I    +DLPLF A++  
Sbjct: 788 TAGAADRSYGIHVAKLAGLPPAVVGRADEVLKLLESGD-QNATIHRLAEDLPLFSAALKR 846

Query: 838 QAEEVAD---------PLRDALDGIDADALSPREALDHIYRLK 871
            A+ VA+          +  AL GID D+L+PR+AL+ +YRL+
Sbjct: 847 PAKVVAEVETAPAGPSAVEVALAGIDPDSLTPRQALEELYRLR 889