Pairwise Alignments

Query, 265 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Sphingobium sp. HT1-2

Subject, 258 a.a., exodeoxyribonuclease III from Magnetospirillum magneticum AMB-1

 Score =  118 bits (295), Expect = 1e-31
 Identities = 86/267 (32%), Positives = 134/267 (50%), Gaps = 22/267 (8%)

Query: 5   LSIASWNINSVRARIDIVERFLTEEAPDILCLQETKVVNEIFPTDMFKRLGYVHQVLNGQ 64
           L IA+WN+NSVRAR+  V  +L   APD++ LQE K  ++ FP    +  GY H  ++GQ
Sbjct: 3   LRIATWNVNSVRARLGNVLDWLGSFAPDVVLLQEIKCQDQDFPLLEIQAAGY-HAAVHGQ 61

Query: 65  RMHHGVAIMSKVPIHE-------DDRFDWQANGEARHVGIRLDNGVRIENVYVPAGGDVA 117
           + ++GVAI+S+ P+ +       DD     ++ +AR++   +  G R+ ++Y+P G    
Sbjct: 62  KSYNGVAILSRHPMSDVRTRLSGDD-----SDEQARYIEATI-GGWRLASLYLPNGNPAP 115

Query: 118 DRTVNPKFGQKLDFIERMIEWSGAL--DNKPTILTGDFNIAPLECDVWSHKQLLDVVSHT 175
                 KF  KL ++ R+   + AL     P +L GDFNI P + DV+   +  D     
Sbjct: 116 ----GDKFDYKLAWMARLRTHAQALLAQGIPFVLGGDFNICPTDDDVYDPPKWRDDALCR 171

Query: 176 PVECELLGRLQASNDWVDIGRHFHPAPARLYTWWSYRAKDWAASDRGRRLDHMWMTRDVA 235
           P +     R   +    +  R  HP     Y++W Y+A  W   D G R+DH  ++   A
Sbjct: 172 P-DSRAAWRSIVNLGLTEAFRALHPGEKGRYSFWDYQAGAW-QRDEGLRIDHFLLSPQAA 229

Query: 236 DKAVAHRVVEPARSWEKPSDHIPIITE 262
           D   A  + +  R  EK SDH P+  E
Sbjct: 230 DCLHACEIDKAPRGKEKASDHTPVWIE 256