Pairwise Alignments

Query, 274 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Sphingobium sp. HT1-2

Subject, 286 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

 Score =  162 bits (411), Expect = 6e-45
 Identities = 108/273 (39%), Positives = 151/273 (55%), Gaps = 11/273 (4%)

Query: 8   AEVIGDPIDHSKSPLIHNFWLQALDIEAEYKKTHVTPEGLSAYF--LQRRADPDWLGCNV 65
           A V+G PI HS+SP+IH++WL+   I   Y    V+P+    +   L+       +G N 
Sbjct: 12  AFVVGYPIKHSRSPIIHSYWLKKFGIAGSYTAVEVSPDDFPKFIATLKEGKPGAAVGGNA 71

Query: 66  TIPHKIAVMDYTDDPGGVRDRIGAMNTIASETAGPLIGTNTDAGGFLQPL--LRDKW-KG 122
           TIPHK A     D P  + + +GA NTI  E  G L  TNTD  GF+  L      W K 
Sbjct: 72  TIPHKEAAYRLADHPDALAEELGAANTIWMEE-GKLHATNTDGYGFVSNLDERHPGWDKT 130

Query: 123 RHAVLIGAGGAARAILFALTSLGVPEITIMARDPAKGQALLDRAGVK---GKVIGMTDAL 179
           + AV+ GAGGA+RA++ +L    V EI ++ R   + + L DR G +        + + +
Sbjct: 131 QRAVVFGAGGASRAVIQSLRDRDVAEIHVVNRTVERARELADRFGPRVFSHPQAALQEVM 190

Query: 180 PAADLLVNSTSLGMVGQPALDLDLSPLPASATVYDIVYAPLETGLLKAARDRGLKTLDGL 239
             A L VN+TSLGM G  A  LD S L A+A V DIVY PL+T +L  A+++G+ T+DGL
Sbjct: 191 HGAGLFVNTTSLGMNGTEAPHLDFSHLAANAVVTDIVYVPLKTPILNMAQEQGIATVDGL 250

Query: 240 EMLIGQAALAFDIFFDAEAPRELDAELRALLTA 272
            ML+ QA   F  +F    P E+D  LR+L+ A
Sbjct: 251 GMLLHQAKPGFRRWF-GRIP-EVDETLRSLIIA 281