Pairwise Alignments

Query, 233 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 252 a.a., DNA polymerase III subunit epsilon from Pseudomonas putida KT2440

 Score =  178 bits (452), Expect = 8e-50
 Identities = 102/229 (44%), Positives = 135/229 (58%), Gaps = 8/229 (3%)

Query: 2   REIIFDTETTGFDPASGDRLVEIGCIELINRVPTGRTFHAYYNPQRDMPSAAEAVHGLSS 61
           R +I DTETTG     G R++EIGC+E+I R  TGR FH Y  P R+    A  VHG++ 
Sbjct: 8   RFVILDTETTGMPVGEGHRIIEIGCVEVIGRRLTGRHFHVYLQPDRESDEGAINVHGITD 67

Query: 62  QFLSDKPLFREGVAELMDFLEDSPLVAHNARFDFGFLNHELKLCAR----DAVSMDRMID 117
            FL  KP F +   E   F++ + LV HNA FD GF+N+E  L  +    D      ++D
Sbjct: 68  AFLVGKPRFGDVAEEFFQFIQGATLVIHNAAFDVGFINNEFALLGQQDRADISQHCTILD 127

Query: 118 TVAIARTLHPGAKHSLDALCTRYGIDRSHRVKHGALLDAELLAQLYVELTGGRQIGLGLA 177
           T+ +AR+ HPG ++SLDALC RY ID S R  HGALLD+ELLA +Y+ +TGG Q  L LA
Sbjct: 128 TLLLARSRHPGQRNSLDALCKRYDIDNSGRELHGALLDSELLADVYLAMTGG-QTSLSLA 186

Query: 178 ---QEEEKEIVRVELTETAVVRPVRPARVFTASAEELERHAAFVAKLDK 223
               + E++      +E   +    P RV  ASAEELE HA  +A + K
Sbjct: 187 GNGADTEEDGQGAGGSEIRRIVGRAPGRVIMASAEELEAHAERLAAIAK 235