Pairwise Alignments

Query, 233 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 471 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 5   IFDTETTGFDPASGDRLVEIGCIELINRVPTGRTFHAYYNPQRDMPSAAEAVHGLSSQFL 64
           I D ETTG  P   D++ EI  I + +       +H   NP+R +P     + G+    +
Sbjct: 4   IVDIETTGGQPHQ-DKITEIA-IFIHDGEKIVDKYHTLINPERPIPYFITQLTGIKDDMV 61

Query: 65  SDKPLFREGVAELMDFLEDSPLVAHNARFDFGFLNHELKLCARDAVSMDRMIDTVAIART 124
            + P F E   E+++F E    VAHN RFD+ F+  E            + + TV ++R+
Sbjct: 62  LEAPKFYEVAKEIVEFTEGKVFVAHNVRFDYSFMKKE--FADLGFTFQRKTLCTVRLSRS 119

Query: 125 LHPG-AKHSLDALCTRYGIDRSHRVKHGALLDAELLAQLYVEL 166
           L PG   +SL  LC    I  S R  H A+ DAE  A L+ +L
Sbjct: 120 LIPGLPSYSLGKLCNSIDIPLSQR--HRAIGDAEATALLFDKL 160