Pairwise Alignments

Query, 697 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Sphingobium sp. HT1-2

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  272 bits (695), Expect = 5e-77
 Identities = 189/576 (32%), Positives = 290/576 (50%), Gaps = 37/576 (6%)

Query: 49  DYNSLKSSPNGQMIRVHAADGSVIVSLGPSFGR---WLSYDQIPSVMVDAMVSTEDRRFY 105
           DY +  SS NG  + V   +  +I  + P        +  DQ+P  +++ +V+ EDR FY
Sbjct: 134 DYVAELSSLNGSKLPVVRLEPLMIGGIYPKNLEDRILIKLDQVPPYLLETLVAVEDRDFY 193

Query: 106 MHPGVDPVGMARAAWVALERRGSGRRWQGASTITQQVARNIFLNNSYSWGRKVREMVLAM 165
            H GV P  +ARA WV       G+  QG ST+TQQ+ +N +L N  S  RK+ E ++AM
Sbjct: 194 HHWGVSPKSIARAVWV---NTSGGKMTQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMAM 250

Query: 166 ALERKFSKQQILELYLNKVYFG----GGAYGIDAASRKFFGHPAQSLDLPEAAIIAGLVK 221
            LE  +SKQ+ILE YLN+V+ G       +G   AS+ FFG P   L L + A++ G+VK
Sbjct: 251 LLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLHQVALLVGMVK 310

Query: 222 APSSYSPTADAEAAIGRAGVVLDLMQENGKISAADHANANLD--GVRMAPEPPQNSVRYF 279
            PS Y+P  + E A+ R  +VLD++++ G  +A   A A     GV    +   +S   F
Sbjct: 311 GPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAKKMPLGVTTRGKLADSSFPGF 370

Query: 280 TDWALPQL-DTLIDE--PNEPLEVYTTIDLGMQNAATAAVKANVS--NGMQGA------- 327
            D    QL +   DE    E L ++T+ D  +Q  A A+V        G +G+       
Sbjct: 371 IDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLTGRKGSDEVEAAM 430

Query: 328 LVSLDRDGAVRAMVGGLDYVTSNYNRATTAVRQPGSAWKIFVYMAALE--AGYTPDTGVT 385
           +V+    G V+AM+G      + +NRA  AVR  GS  K  VY+ ALE  + YT  + ++
Sbjct: 431 VVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYTLTSWLS 490

Query: 386 DEPVTING-----WSPRNSNGRFAGAIDIRTAFAYSINTVAAKLGVEVGFPTVADMARRF 440
           D+P+++ G     W+P+N + R  G + +    A+S N   ++LG+EVG P V     R 
Sbjct: 491 DDPLSVKGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNISTSRLGLEVGVPNVLKTIARL 550

Query: 441 GITTPINTHPSMVLGTSDVRLIDMTRAFASIARKGVAVTPYGITKVTTADGRMLYQHQDD 500
           G+T      PS++LG   +  +++   + ++A  G      GI  V TA+G  L ++   
Sbjct: 551 GVTREFPAFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRSVLTAEGEPLKRYPFQ 610

Query: 501 TSRVLVAPWVAAGMTDLMQTAVSTGTGRAAQIGRP----VAGKTGTTNSGKDGWFLGFSS 556
             +   A  +   + + MQ  +  GTGR+     P    +AGKTGT+N  +D WF GF  
Sbjct: 611 IQQRFDAGSIYL-IQNAMQRVMREGTGRSVYSVLPANLTLAGKTGTSNDSRDSWFAGFGQ 669

Query: 557 GITTGVWVGRDDAKAVPSLYGGRAPAHAFADYMKVA 592
            +   VW+GRDD    P   G       +  +M+ A
Sbjct: 670 DVLAVVWLGRDDNGKTP-FTGATGALQVWTSFMRKA 704



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)

Query: 3  RSDKSKKAPGKA--KKWLVRGLKIGLVGAFAGLVAIGVAVFI 42
          RS +S+K P     + WL   LK+GLVG    +V  G AV++
Sbjct: 5  RSPRSRKKPPSRGLRPWLGWALKLGLVGL---VVLAGFAVYL 43