Pairwise Alignments

Query, 428 a.a., tRNA-5-carboxymethylaminomethyl-2- thiouridine(34) synthesis protein MnmE from Sphingobium sp. HT1-2

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 12/146 (8%)

Query: 165 LSAMAEAALDFSDEDDVPDADIEARIGQGVMALADDVGALLSAPSAERLRDGIRVVLAGP 224
           ++A+ EA L     D   +A +E  + +G  A+       +  PS    +DGI++ + G 
Sbjct: 151 INALMEAVLGHLPRDAEEEA-LEQDVAEGEEAVR------IPGPSE---KDGIKIAIIGR 200

Query: 225 PNAGKSTLLNRLVGREAAIVSDIAGTTRDRIEVPAAIGGTAFLFTDTAGLRE--ETGDAI 282
           PN GKSTL+NR++G E  +V D  GTTRD I +P    G  + F DTAG+R+  +  + +
Sbjct: 201 PNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERDGEKYTFIDTAGVRKRGKIHEEV 260

Query: 283 EAIGIDRARAALEAADIILWLGEPDE 308
           E   + +   A++ A++++++ +  E
Sbjct: 261 EKFSVVKTLQAIKDANVVIFVMDARE 286



 Score = 61.2 bits (147), Expect = 7e-14
 Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 11/90 (12%)

Query: 219 VVLAGPPNAGKSTLLNRLVGREAAIVSDIAGTTRDRIEVPAAIGGTAFLFTDTAGLREET 278
           + L G PN GKST+ NRL     AIV D++G TRDR    A+  G +F+  DT G+   T
Sbjct: 5   IALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI---T 61

Query: 279 GDAIEAIGIDRARA-----ALEAADIILWL 303
           GD    +G+D   A     A+E AD +L+L
Sbjct: 62  GD---EVGMDEKMAEQSLMAIEEADYVLFL 88