Pairwise Alignments

Query, 487 a.a., Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) from Sphingobium sp. HT1-2

Subject, 468 a.a., Uncharacterized HTH-type transcriptional regulator YdcR from Escherichia coli ECRC62

 Score =  135 bits (341), Expect = 2e-36
 Identities = 116/447 (25%), Positives = 196/447 (43%), Gaps = 40/447 (8%)

Query: 28  YRQLAQALRMLVLDGRIGLNVRLPGERELAAALGLSRTTIAAAFDRLRDEGYLESRQGSG 87
           Y+QLA+ LR  +  G      RLP  R+  A  G+S  T++ A+  L  +GY+ +R  SG
Sbjct: 4   YQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSG 63

Query: 88  SVTRLPPGRVETPTPDIDGVTGDNLLNWTH------------AALPAAPGVGLAYAHAVE 135
               + P  ++ P   +  VT D  ++               + +P A          ++
Sbjct: 64  YY--VAPQAIKMPKAPVIPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFPLQ 121

Query: 136 ALPAYLGDLGYD----------PLGLPVLRRAIAAHYERRGCPTDPDQIMITNGAQQGFS 185
            L   L  +             P G   LR+AIA  Y  +G    PD+I+IT GA +  +
Sbjct: 122 QLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYALQGITISPDEIVITAGALEALN 181

Query: 186 LLLQWLAGPGDRAVIDHPTYHNAIQALQRANVVPVPVGLPV-HGWDIDAMDAAFRQTAPR 244
           L LQ +  PGD  ++++P ++ A+QAL+R  +  + V   V  G D+ A++ A ++   +
Sbjct: 182 LSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQEYPVK 241

Query: 245 FAYIIADFHNPTGRSMDPATRRALVSVAMRTHTPLVIDETMVAMGLDGAPPPPVACHDPS 304
             +++ +  NP G ++ P  +  LV++  + +  L+ D+    +      P P    D  
Sbjct: 242 ACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWD-- 299

Query: 305 GRH--VITLGSASKIFWGGLRVGWIRADP-----QTVAALGRIRTTMDMASPVVEQLAVA 357
            RH  V+   S SK    G R+GW+ A       Q +  +  + T+  M   +V+ L+  
Sbjct: 300 -RHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLALVDYLSTR 358

Query: 358 QLMDADEGLGPRAAMLRDRRDHLLAQLEKHLP-HWRVESPAGGLSLWAELPR-AEASALA 415
           +    D  L      L +R+      L ++LP   ++     G  LW ELP   +A  L+
Sbjct: 359 RY---DAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHSDSGYFLWLELPEPLDAGELS 415

Query: 416 ALAGNHGVRIAAGPRFGVNGAFERFLR 442
             A  H + IA G  F     + RF R
Sbjct: 416 LAALTHHISIAPGKMFSTGENWSRFFR 442