Pairwise Alignments

Query, 169 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 56.6 bits (135), Expect = 2e-13
 Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 8/149 (5%)

Query: 14  YSAYIPALRRYFARRVASAHIVDDLVQDVMLRM-HVRQSPDGIDNLEGYIFRTASSVLRD 72
           Y A+   L  +  RR+   H   DL QD  +R+   R++P  ++    ++   A  VL +
Sbjct: 19  YHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEP-RAFLATVAKRVLCN 77

Query: 73  QARRDQVRHA--KGHDELTEKDHPAEERTADRVLQAREEIAQVVRALEELPERTRDIFLM 130
             RR ++  A  +   ++ E+  P EE+ A       E +  +   L+ LP   +  FL+
Sbjct: 78  HFRRQELERAYLQALAQVPEEVAPCEEQKAIIF----ETLLALDHLLDGLPPLVKRAFLL 133

Query: 131 RRYEGLAYGDIAERLGISVSAIEKHVAKA 159
            + +GL  G+IA  LGIS++ +++++ KA
Sbjct: 134 AQVDGLGQGEIARELGISLATVKRYLNKA 162