Pairwise Alignments

Query, 169 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 69.3 bits (168), Expect = 3e-17
 Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 10/139 (7%)

Query: 26  ARRVASAHIVDDLVQDVMLRMHVRQSPDGIDNLEGYIFRTASSVLRDQARRDQVRHAKGH 85
           +RRV       DLVQ++ LR   R+    ++ L+ Y+ R A ++  D  R +  R     
Sbjct: 37  SRRVGCRATASDLVQELFLRFW-RRPEVKVEALDTYLLRCAGNLAIDHLRSESSR----- 90

Query: 86  DELTEKDHPAEE----RTADRVLQAREEIAQVVRALEELPERTRDIFLMRRYEGLAYGDI 141
           + + E   P  E    +  ++ ++   ++ ++   L  LPERTR IFL+ R  G  Y +I
Sbjct: 91  ERVAEAAVPVSEASLAQAPEQAVEVDHDLQRIEATLRALPERTRQIFLLNRIHGCKYSEI 150

Query: 142 AERLGISVSAIEKHVAKAV 160
           A+ + +S SA+EKH+ +A+
Sbjct: 151 AKAMQLSQSAVEKHMMRAL 169