Pairwise Alignments

Query, 169 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

 Score = 68.6 bits (166), Expect = 1e-16
 Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 3/149 (2%)

Query: 21  LRRYFARRVASAHIVDDLVQDVMLRM-HVRQSPDGIDNLEGYIFRTASSVLRDQARRDQV 79
           L ++  RR++      D+ Q+  L++ ++ +    + +   +IFR A ++  D  RR+Q 
Sbjct: 20  LLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVLHARSFIFRVAGNLAIDALRREQ- 78

Query: 80  RHAKGHDELTEKDHPAEERTA-DRVLQAREEIAQVVRALEELPERTRDIFLMRRYEGLAY 138
           R A  HD+       A    A +  L ARE +  + +AL +LP+  R   L+ R EGL  
Sbjct: 79  RIAASHDDSDGACEVACPAPAPEAALLARERLQILDQALLQLPDNARQALLLNRVEGLTQ 138

Query: 139 GDIAERLGISVSAIEKHVAKAVAHIARRM 167
             +A+RLG+S S + K++ +A+ H   R+
Sbjct: 139 KQVAQRLGVSESMVAKYIGQALRHCRGRL 167