Pairwise Alignments

Query, 169 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 65.1 bits (157), Expect = 6e-16
 Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 6/149 (4%)

Query: 14  YSAYIPALRRYFARRVASAHIVDDLVQDVMLRMHVRQSPDGIDNLEGYIFRTASSVLRDQ 73
           Y ++   LR +   RV  +    DL QD  +R+   +    +     Y+   A  ++ DQ
Sbjct: 16  YQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMIDQ 75

Query: 74  ARRDQVRHA--KGHDELTEKDHPAEERTADRVLQAREEIAQVVRALEELPERTRDIFLMR 131
            RR  +  A  +G   L E + P+EE      L   + + ++ RAL++L  R R  FL+ 
Sbjct: 76  FRRRALERAYQEGLAHLPEAEVPSEEDK----LVILDSLERLDRALQQLKPRVRQAFLLA 131

Query: 132 RYEGLAYGDIAERLGISVSAIEKHVAKAV 160
           + +GL+   +A+RLG+S + +E+ +AKA+
Sbjct: 132 QLDGLSIVQVAQRLGVSRATVERDLAKAL 160