Pairwise Alignments

Query, 316 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Sphingobium sp. HT1-2

Subject, 320 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Pseudomonas putida KT2440

 Score =  239 bits (611), Expect = 5e-68
 Identities = 138/303 (45%), Positives = 187/303 (61%), Gaps = 12/303 (3%)

Query: 18  GLRLDRALAELLPDLSRERIKALIVEGQIVSGGRSLNPSMKVAVGQDYSITLPAPVALDA 77
           G RLD+  A+L  + SR R+ + I EG++   G  + P   V  G   ++        + 
Sbjct: 17  GQRLDQVAAQLFAEYSRSRLTSWIKEGRLTVDGAVVRPRDLVHGGSQLALEAEQEAQGEW 76

Query: 78  VAQDIPLDIVHEDADLIVVDKPAGLVVHPAAGNLDGTLVNALLHHCDGQLSGIGGVARPG 137
           +A+DI LDIV+ED  ++V++KPAGLVVHPAAG+  GTL+NALLHH    +  I  V R G
Sbjct: 77  IAEDIELDIVYEDDHILVINKPAGLVVHPAAGHASGTLLNALLHH----VPDIVNVPRAG 132

Query: 138 IVHRIDKDTSGLLVVAKSDKAHEGLARQFKDHSIDRLYAAIVYGIPAPGSGTVDAWIGRS 197
           IVHR+DKDT+GL+VVAK+ +A   L  Q +   + R+Y  IV G+   G G +DA IGR 
Sbjct: 133 IVHRLDKDTTGLMVVAKTLQAQTKLVEQMQARKVSRIYECIVIGVVTAG-GKIDAPIGRH 191

Query: 198 DADRKKMAVHREGRGKHAVTHYRVMERLRGAAMVECRLETGRTHQVRVHMAHLGHPLIGD 257
              R++MAV     GK AV+HYRV++R R    V  +LETGRTHQ+RVHMAH+G PL+GD
Sbjct: 192 GGMRQRMAV--TDGGKPAVSHYRVLKRFRSHTHVRVKLETGRTHQIRVHMAHVGFPLVGD 249

Query: 258 PVYGRDRKGFKSILETL-----GFKRQALHAKRLGFIHPVTEEPLAFDSPLPADMQELLS 312
             YG   +   +   T+      F RQALHA+ L   HP+T E + ++SPLP D   LLS
Sbjct: 250 QTYGGRFRIPPAASPTMVEAVKTFPRQALHARFLALAHPITGEVMKWESPLPDDFVWLLS 309

Query: 313 ELH 315
            L+
Sbjct: 310 LLN 312