Pairwise Alignments

Query, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Sphingobium sp. HT1-2

Subject, 447 a.a., protease HslVU, ATPase component from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 9e-23
 Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 5/106 (4%)

Query: 66  TPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNHGSKPGEV--ELAKSNILLVGPTGC 123
           TP+EI   L+ ++IGQ  AKR +++A+ N ++R+     P E+  E+   NIL++GPTG 
Sbjct: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQ---LPAELRAEVTPKNILMIGPTGV 60

Query: 124 GKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLLQAS 169
           GKT +A+ LAK  + PF   +AT  TE GYVG DVE+II  L  A+
Sbjct: 61  GKTEIARRLAKLANAPFLKVEATKFTEVGYVGRDVESIIRDLADAA 106



 Score = 80.9 bits (198), Expect = 7e-20
 Identities = 70/229 (30%), Positives = 101/229 (44%), Gaps = 60/229 (26%)

Query: 177 QRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGGRKHPQQEFL 236
           Q GIV+IDEIDK++++        DVS EGVQ+ LL L+EG T +            +  
Sbjct: 249 QHGIVFIDEIDKVAKRGNVGGA--DVSREGVQRDLLPLIEGCTVNT-----------KLG 295

Query: 237 QVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGAHVAAPEERKTGELLRQSEPEDLLKF 296
            V T +ILFI  GAF                    H++ P +                  
Sbjct: 296 MVKTDHILFIASGAF--------------------HLSKPSD------------------ 317

Query: 297 GLIPEFVGRLPVIATLEDLDVTALVKILVEPKNALVKQYGKLFDMENVELSFTDDALTAI 356
            L+PE  GRLP+   L+ L      +IL EP  +L +QY  L   E + + F  D +  +
Sbjct: 318 -LVPELQGRLPIRVELKALTPEDFERILQEPHASLTEQYQALLKTEGLNIEFLADGIKRL 376

Query: 357 AKKA--IERKT---GARGLRSILEAILLDTMF---DLPSMEGVGEVVVD 397
           A+ A  +  KT   GAR L ++LE +L +  F   DL S      + +D
Sbjct: 377 AEIAYQVNEKTENIGARRLHTLLERLLEEVSFSAGDLASTHDEAPIQID 425