Pairwise Alignments

Query, 201 a.a., RNA polymerase ECF-type sigma factor from Sphingobium sp. HT1-2

Subject, 170 a.a., FIG006045: Sigma factor, ECF subfamily from Sphingobium sp. HT1-2

 Score = 59.7 bits (143), Expect = 3e-14
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 4/160 (2%)

Query: 14  VILPQEAALRGRLRRILPSTHELEDMVAEVLARAYATENWENVTTGRAYLFTIARNLVID 73
           ++L +  +L   +  IL      ED+   +  R    E+   +   RAYLF +A NL  D
Sbjct: 11  LLLQERTSLLRLVESILRDRPAAEDVTQSLWFRVQRIEDDPPILNKRAYLFRLAANLAKD 70

Query: 74  TARRN-KVVSFETIADL---ELLGGENTIEAQLHAREALRQVEAIVDSLPTQCRRVFILR 129
             R + +  +    AD    E+       + +L  R+ L    A +D LP + R +FILR
Sbjct: 71  RIRADGRYAALFHAADTLPEEIPADMVGADTELSDRQRLAVTMAAIDELPARTREIFILR 130

Query: 130 RIHEKSMLEIAEEMSLSVSTVEKHLAKAIGIVMRAWAERE 169
           +  E ++ +IA  + +S S V +HL +A+   M    E E
Sbjct: 131 KFDELTLDDIAHRIGISRSMVVRHLQQALRHCMTRLGESE 170