Pairwise Alignments

Query, 326 a.a., anti-FecI sigma factor FecR from Sphingobium sp. HT1-2

Subject, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 78/296 (26%), Positives = 128/296 (43%), Gaps = 22/296 (7%)

Query: 9   RLNSDPTPQDEDEICAWIEADPRHGVAFARAEAAWDAAERLKSAAAEVNLPPLEAIVSEE 68
           R+N  P   +      W+ ADP H  A+ +A+  W  +    +  A+     L+  +   
Sbjct: 21  RINEQPGQAEGAAFKRWLLADPAHRAAYDQAQVLWQKSAAPAARLADEEQDALQRYLDAM 80

Query: 69  QQRRLSRNIMIAAGIAIAFFIVAAIVTIRTF------SGVDRYETAVGQIRDVALADGSI 122
            +          AG+A+A  +V A+     +        +    ++ GQIR V LAD S 
Sbjct: 81  ARPPARGGWRRVAGLALAACLVLAVGVAGGWHPGYWLQDLQADYSSTGQIRQVILADQSQ 140

Query: 123 LHLNSNSEAEVRFTDIGRKVRVLKGEASFDVAHDKGRPFDVEVRSAQIRAVGTAFNVRMR 182
           + L++ S   V F    R+VR+L G A F+V H  G PF VE    ++R +GT F VR +
Sbjct: 141 VTLDAGSAIAVDFAQGERRVRLLHGAAFFEVTH-TGEPFLVEAAGGEVRVLGTQFEVREQ 199

Query: 183 PSVVELTVTQGTV-------TVHSGNSGLEKVSAGSGAVIQSRSIDLTHLSPKLIDQRTA 235
               ++TV  G V       TV    +  ++++  +G V  + ++D         D R A
Sbjct: 200 GEGAQVTVRSGRVGVSPAQGTVARELTANQQLTYRAGRVGDTLAVD--------SDNRLA 251

Query: 236 WRDQMVELDGETIEQAASEFNRYRRAPILIGDARVSSLRVGGRFRVSDSKEFLSAL 291
           WR   +      + Q   +  RY    IL+ D  +   +V G F V++    L +L
Sbjct: 252 WRQGWLNYYQVPLAQVIDDLGRYYPGRILLLDGDLGQRKVSGSFPVAEPLLALDSL 307