Pairwise Alignments

Query, 326 a.a., anti-FecI sigma factor FecR from Sphingobium sp. HT1-2

Subject, 316 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 69/300 (23%), Positives = 138/300 (46%), Gaps = 13/300 (4%)

Query: 2   EAARLLARLNSD-PTPQDEDEICAWIEADPRHGVAFARAEAAWDAAERLKSAAAEVNLPP 60
           +A   L +L  D P+P+ E +   W+ + P + +A+ R     +  + L     +++   
Sbjct: 13  QAIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAWQRVS---NLGDELAGLPKDLSRRT 69

Query: 61  LEAIVSEEQQRRLSRNIM--IAAGIAIAFFIVAAIVTIRTFSGVDRYETAVGQIRDVALA 118
           L+A    +  RR    ++  +A G ++ +   AA   +     +    TA G+ R    +
Sbjct: 70  LDASQHPKASRRDHLKLLGLLAVGGSLGW---AAREPLGLPQLLADTSTATGERRQWQGS 126

Query: 119 DGSILHLNSNSEAEVRFTDIGRKVRVLKGEASFDVAHDKGRPFDVEVRSAQIRAVGTAFN 178
           DGS L LN+ S  ++ ++   R+++++ GE S +   +  RPF V  R   +        
Sbjct: 127 DGSRLQLNTASAIDLHYSAEQRQLKLIHGEVSLESNPNDNRPFHVATRVGPLTTFDGQLL 186

Query: 179 VRMRPSVVELTVTQGTVTVHSGNSGLEKVSAGSGAVIQSRSIDLTHLSPKLIDQRTAWRD 238
           +R     + L+V +G VT+   ++   +V  G    +   + D +  +  L +    W +
Sbjct: 187 LRENSQGLLLSVRRGEVTLFPASASARQVLPGETLQV---TADGSIQARTLHNDPWGWTE 243

Query: 239 QMVELDGETIEQAASEFNRYRRAPILIGDARVSSLRVGGRFRVSDSKEFLSALQLSLPIR 298
            ++ +    + + ASE  RYR   +L     V+ L+V G ++++D+ + L  L  SLP+R
Sbjct: 244 GVLSVQQMPLAEFASELGRYRPG-LLRCAPEVAGLKVSGTYQLADTGQILQLLTRSLPVR 302