Pairwise Alignments

Query, 326 a.a., anti-FecI sigma factor FecR from Sphingobium sp. HT1-2

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 76/282 (26%), Positives = 128/282 (45%), Gaps = 13/282 (4%)

Query: 24  AWIEADPRHGVAFARAEAAWDAAERLKSAAAEVNLPPLEAIVSEEQQRRLSRNIMIAAGI 83
           AW+  D RH +A++  E        L S  AE      +++  +   RR     +  AG+
Sbjct: 36  AWLNEDTRHRLAWSYVENINQRFGGL-SGQAEQARQVFDSVRRDRHSRRAVLGSLCVAGV 94

Query: 84  AIAF----FIVAAIVTIRTFSGVDRYETAVGQIRDVALADGSILHLNSNSEAEVRFTDIG 139
           A       +    + + R +     Y T +G++R V LADGS L LN  +  +V+F +  
Sbjct: 95  AGVLGWGGWQRGWVDSPRAWFAT--YRTGLGEVRPVTLADGSQLWLNGGTALDVQFDEGS 152

Query: 140 RKVRVLKGEASFDVAHDKGRPFDVEVRSAQIRAVGTAFNVRMRPSVVELTVTQGTVTVHS 199
           R++R+ +GE   +   D  RP  V  R+ +++ +GT F+VR +     L+V  G V    
Sbjct: 153 RQLRLYRGEILIESGKDP-RPLSVVTRAGRVQPLGTRFSVRDQGLQTTLSVFAGAVQATC 211

Query: 200 GNSGLE-KVSAGSGAVIQSRSIDLTHLSPKLIDQRTAWRDQMVELDGETIEQAASEFNRY 258
             SG +  + AG   V  ++ +     + +L   R  W   ++  +   + Q       Y
Sbjct: 212 SGSGRQTTLQAGQMMVFDAQQVGAPSTAQRL---REDWSRGVLVAEDMPLVQMIDILRDY 268

Query: 259 RRAPILIGDARVSSLRVGGRFRVSDSKEFLSALQLSLPIRAV 300
           R   + I D  + SLR  G F + D+   L+ L+ +LPIR V
Sbjct: 269 RHGHLGI-DPAIGSLRAVGTFPLLDTDRALAMLERALPIRVV 309