Pairwise Alignments

Query, 326 a.a., anti-FecI sigma factor FecR from Sphingobium sp. HT1-2

Subject, 318 a.a., putative Transmembrane sensor protein from Pseudomonas putida KT2440

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 12  SDPTPQDEDEICAWIEADPRHGVAFARAEAAWDAAERLKSAAAEVNLPPLEAIVSEEQ-- 69
           S  TP + +E   W  A   H    ARA     A ++  SAAA    P  +A++      
Sbjct: 24  SSGTPDERNEFMRWHAASEEH----ARAWRQLGAMDQRVSAAAG---PARQALLQSRASL 76

Query: 70  QRRLSRNIMIAAGIAIAFFIVAAIVTIRTFSGVDRY-----ETAVGQIRDVALADGSILH 124
           +RR+ +   +  G+A  F + A +  +   S    Y      TA G++R + L DG++L 
Sbjct: 77  RRRIGK---VGGGLAGTFLLGALLAWVGAPSLAPSYWLADQRTATGELRTLRLEDGTLLS 133

Query: 125 LNSNSEAEVRFTDIGRKVRVLKGEASFDVAHDKGRPFDVEVRSAQIRAVGTAFNVRMRPS 184
           LN+++  ++ +    R + + +GE S +  H   RP  V     ++R +GT F VR    
Sbjct: 134 LNTHTAVDIEYAGAQRVIVLHQGEISVETGHQDPRPLLVRTEDGRLRPLGTRFLVRREAG 193

Query: 185 VVELTVTQGTVTVHSGNSGLEKV-SAGSGAVIQSRSIDLTHLSPKLIDQRTAWRDQMVEL 243
              L V Q +V     +SG E+V   G   ++ +  +      P   D   AW   M+ +
Sbjct: 194 GTRLEVLQASVAAMPHDSGDEQVLREGQQVLMNANGLGEVGTVPAGAD---AWTRGMLVV 250

Query: 244 DGETIEQAASEFNRYRRAPILIGDARVSSLRVGGRFRVSDSKEFLSALQLSLPIR 298
           D   +    +   +YR   + + DA+V+ LRV G F ++++   L++L  +LP++
Sbjct: 251 DNVRLGDLLATLGQYRSGYLGV-DAKVADLRVTGSFPLTNTDLALASLVPALPVK 304