Pairwise Alignments

Query, 549 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 497 a.a., Phage portal protein, lambda family from Pseudomonas putida KT2440

 Score =  114 bits (284), Expect = 1e-29
 Identities = 122/497 (24%), Positives = 201/497 (40%), Gaps = 48/497 (9%)

Query: 42  NGWTPPPGFAGSSSYGERDAILGRARDLDKNNAWINGGLDRRVESVIGGSIRLAAQPEIT 101
           +GW  P     S        +  R+R   +N+ +    +D+RV ++IG  I     P+  
Sbjct: 32  SGWDAPDTGPNSLIMPALRNLRSRSRAAVRNDPYAANVIDKRVSNLIGTGIT----PQPR 87

Query: 102 VLNRDFDWRMKWTAKTEARFKVWGKDIERRCDARKMLTFGQITKLAYLTYIRDGECAAEI 161
           +L++         A  +A  ++W +D     DA +   F     L   T  + GEC   +
Sbjct: 88  LLDK---------ALRKAMQELW-EDWVDESDADERTDFYGQQALVARTVEQSGECFVRL 137

Query: 162 RDDKR--GLTNTTNVLLFEAERISTPPLLKVEEGPLLRNGIAFDQNGAAIGYHVASRHPA 219
           R  +   GL     V     E +          G  +R GI F+  G  + Y     HP+
Sbjct: 138 RPRRLEDGLAVPLQVQCLAPEFVPHDKFEVTRTGNTIRAGIEFNGIGRRVAYWCYRNHPS 197

Query: 220 DSAGRKGIDRWDYIPRFGKTGRAKLVHVFSPRFAEQNRGISRLAEAMVPAKMLDRVDRAE 279
           D A         Y P   +    +++H+F P    Q RG+ RLA  +   + LD  D A 
Sbjct: 198 DKASLNA----GYNPLV-RVPADQMLHIFEPLEPGQLRGVPRLAPILKRLRSLDNYDDAV 252

Query: 280 VQAALKSAILSFFIKSP------GSTSDLQAALAPTGNDNELDAWVDQYLDYRTKSPVRM 333
           +     + + + F++ P      G   D+    A     ++ DA+            V +
Sbjct: 253 LFRQEVANLFAGFVRKPAPDGLGGPPMDMITGGAVV---HDRDAFTPM---------VAL 300

Query: 334 DAAQIVHLLPEEDVVTPDASHPNSNYPQFARFVLQKVAASLGISYPQLSQDWSGINYSSA 393
           +   +  L P E V   D     +NYP F R  L   +A  G+ Y  ++ D  G+N    
Sbjct: 301 EPGTMQELGPGEQVEFSDPPDGGNNYPDFMRQQLMAASAGAGLPYELMTGDMRGVNDRVI 360

Query: 394 RALLNELWRSFLEDREF--FTQQFCTPIYAAWLEVEVANDDIKVPGGPANFYRNKTAICM 451
           R +LNE +R  LE  +F  +  Q C P+ AAW+++ V    + +     ++  N+     
Sbjct: 361 RVVLNE-FRRRLEQLQFSVYVHQLCRPVRAAWMDMAVLAGALDL----VDYTLNRRQYLR 415

Query: 452 AEWVGPGRGSVDPLKEANADNLDTAAGRKSTVEAILERGRYPADVLSEEAWYLGARKEHG 511
             WV  G   + P+++  A  L+ AAG  S  E  L  G   A+++ EE     AR  HG
Sbjct: 416 TRWVPQGWAYIQPVQDVQARMLEVAAGFTSRSEMCLRSGT-DAEIVDEENASDIAR-AHG 473

Query: 512 LDAPNHNVKAAPTGAED 528
           L    + + A    ++D
Sbjct: 474 LGLKYNGLSAIDDESDD 490