Pairwise Alignments

Query, 472 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Sphingobium sp. HT1-2

Subject, 477 a.a., RND transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  182 bits (463), Expect = 2e-50
 Identities = 126/487 (25%), Positives = 229/487 (47%), Gaps = 37/487 (7%)

Query: 6   KAMSVASLALTLAAC---DMAPKYARPELPVPQASPQGPAYAAAVEGGAAIVPADTAWRD 62
           K + +A L+LT+ AC    +  + A   +P    + Q     A ++           W++
Sbjct: 8   KCLGIACLSLTVTACVTPSVVERTANTTVPASFNNSQDTINTATLQ-----------WKE 56

Query: 63  FFTDPRLVRVIETSLANNRDLRIAVANVEQARAQYKVQRADLLPTVGATGTATYSEQPLV 122
           +FTDP L+ +I+T+L+NN++L I +  +E +R + + ++ + LP VG  G A   + P  
Sbjct: 57  YFTDPNLIALIDTALSNNQELNITLQEIEISRNEVRARKGEYLPFVGLKGAAGVDKVPRY 116

Query: 123 QFGQSQRLNTDVYQAQ----------VGISA-WEIDLFGRVRNLTKAAQEQYFASVENRN 171
               +    TD+   +          VG  A WE+D++ ++ N  KAA  +Y +SVE RN
Sbjct: 117 TNIGAMEATTDIKPGKEMPEPLQDYLVGAYATWEVDIWSKLHNAKKAAVNRYLSSVEGRN 176

Query: 172 AAQTALVAEVATAWVNMAADQELLSIARTLATAFKETLDLNKARFDKGIASELEVREAQT 231
              T L+AE+A ++  + A    L+I +         L++ K + +    +EL VR  Q 
Sbjct: 177 FMVTNLIAEIADSYYELLALDNQLAIVQKNIEIQNNALEIVKLQKEATRVTELAVRRFQA 236

Query: 232 SYDQARAAIASATTLVAQDQNALNLLAGTTLGSEDLPSALPEGHVTLDNL-----PAELP 286
                ++        + + +N +N L G        P  +     T +NL      A +P
Sbjct: 237 QVLHTKSLQYDIQQRIIETENRINFLVGR------FPQPVQRNDETFENLIPETIQAGIP 290

Query: 287 STLLLRRPDIASAEHQLIAANANIGAARAAFFPQLSLTAALGTVSLGLSGLFKS-GSDTW 345
           + LL  R DI  AE  L AA  +I  A+A F+P L ++A +G  +   S L K+  S  +
Sbjct: 291 AQLLQNRADIKQAELDLTAAKLDIKVAKARFYPSLGISAGIGFNAFNPSYLLKTPESLLY 350

Query: 346 SVAPSATLPIFDFGRNKGNLRYARATYDAMLATYEKSVQTGFREVADALARRGTMTDQVE 405
           S+      P+ +    K +   A A     +  YE+++   + EVA+ LAR   +    +
Sbjct: 351 SLTGDLVAPLVNRNAIKADYNSANAKQIQAVYNYERTILNAYVEVANQLARINNLEKSYD 410

Query: 406 AQTSQRDAARKAYDLTQARFRAGVDGFLPTLVSQRTLSSAEQSLVSTRLARLTNMIELYR 465
            +  + +A  ++  ++   F +    ++  L++QR    +   L+ T++ ++  M+ +YR
Sbjct: 411 LKAQEVEALNQSVVISNMLFASARADYMEVLMTQRDALESRFDLIETKMQQMNAMVNIYR 470

Query: 466 AMGGGLK 472
           A+GGG K
Sbjct: 471 ALGGGWK 477