Pairwise Alignments

Query, 560 a.a., HlyB/MsbA family ABC transporter from Sphingobium sp. HT1-2

Subject, 555 a.a., Lipid A export permease/ATP-binding protein MsbA from Variovorax sp. SCN45

 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 107/528 (20%), Positives = 202/528 (38%), Gaps = 74/528 (14%)

Query: 38  LLSLATPISVQLLINSVAR--TALVAPLWILSGVLLALLLVVAGLSALRVYLLAIFERRI 95
           L ++  P+   LL   + R  T    PLW +   +L L  V      +  Y L+      
Sbjct: 2   LAAITEPLMAALLKPLLDRGFTRGEMPLWFVPAAVLLLFAVRGIAQFISQYALSRIANEG 61

Query: 96  FARVVAEITVRAVHAQNPFFVDESRGSLFNRYFDMVIVQKSVPSLVIGAFTIVLQGAVGL 155
             ++   +  R + A+   F  +S  +L N           V  +  GA  +V Q  +GL
Sbjct: 62  MQKLRRVMFERLLGAELALFTRQSASALSNTV---------VYEVQTGAMLLV-QALLGL 111

Query: 156 VVTSFYHPFFLAFNLVLVTVCLMIWLAWRHGAITGAVGVSHAKHNAAHWLESVGGSNGFY 215
               F          ++  +  +++L W+   I   +  S +      W+  V  S   Y
Sbjct: 112 SRDGF---------TLIALLGYLVYLNWKLTLIVAFLVPSIS------WIMKVF-SKRLY 155

Query: 216 KSARHLNFAMDRSETVIADYIAAHRRYFRYSFAQTLGYFLVYAFAAAALLALGGNLILAG 275
           +  +    A D    V+ + + AHR    +      G            LA+   +  A 
Sbjct: 156 RLTQQGQQATDELAYVVEENVLAHRVVRLHGAEGAQGRRFEQLSQRLNRLAVKSTIAQAA 215

Query: 276 QLSIGQLVAAELILSGVFYGIYQLG----------SYLDTFYDLVASSEELSQILA---- 321
              + Q++A+  +   V   ++Q G          +Y+     L+A    L+++      
Sbjct: 216 TTPLTQMMASLALSVVVMIALWQSGKQGFTVGGFVAYITAMLMLIAPIRRLAEVAGPITR 275

Query: 322 --------------IPQERLGQRGEAPRDGSVRFRDVEI----DKAQ-----INFEIASG 358
                         +  E  G       +G +  R+V++    D  Q     +N  I  G
Sbjct: 276 GLAALERGLVLIDEVAPESQGTFRIEHAEGRIELRNVQVSYRGDDEQRALDGVNLTIEPG 335

Query: 359 EQAVILAEPGM-ESALALLLKRHAAPDSGIVLIGGSELGSFDMYLLRSAVMVLNRPTIID 417
           +    +   G  ++ L  LL R   P SG VL+ G +   +++  LR+   ++++  ++ 
Sbjct: 336 QVVAFVGPSGSGKTTLVNLLPRFVQPSSGQVLLDGHDTSEWELKSLRAQFAMVSQDVVM- 394

Query: 418 VTLREYLS--FAEGRDMDGARIMNALERVGLGARLARLPHGLDTQLASSGSPLSIVEVMQ 475
             L E L+   A G ++D  R++  ++   L + +  LP G+DT L  + + LS  +  +
Sbjct: 395 --LNETLAANVALGSEIDRERVLQCIDAANLSSHVENLPQGIDTVLGHNATQLSGGQRQR 452

Query: 476 LKLANALLSRPRVLLLSQLYDMMPIAS---LKATLAELRAAGTTVLLS 520
           L +A AL     VLLL +    +   S   ++  L  L    TT++++
Sbjct: 453 LAIARALYKNAPVLLLDEATSALDTESERLVQDALQRLMQNRTTLIVA 500