Pairwise Alignments

Query, 437 a.a., Replication-associated recombination protein RarA from Sphingobium sp. HT1-2

Subject, 430 a.a., Replication-associated recombination protein RarA from Variovorax sp. SCN45

 Score =  392 bits (1008), Expect = e-114
 Identities = 210/423 (49%), Positives = 281/423 (66%), Gaps = 7/423 (1%)

Query: 17  HAPLADRLRPAVLADVVGQEHLTGPDGAIGRMVAAGRLSSILFWGPPGTGKTTISRLLAD 76
           H PLA+RLRP  L +V+GQ+HL GP  ++     +G+  S + WGPPGTGKTTI+RL+AD
Sbjct: 6   HQPLAERLRPRTLGEVIGQQHLLGPGMSLRIAFESGQPHSCILWGPPGTGKTTIARLMAD 65

Query: 77  AVGMRFEPISAVFSGVADLKKV--FAAAKDHGRRGEKTLLFVDEIHRFNRAQQDSFLPFV 134
           A   +F  ISAV  GV D+++    A A   G   ++T++FVDE+HRFN++QQD+FLP V
Sbjct: 66  AFDAQFLSISAVLGGVKDIREAVDLATAARDGLTQQRTIVFVDEVHRFNKSQQDAFLPHV 125

Query: 135 EDGTVTLVGATTENPSFELNAALLSRAQVLILRRLDADALEQLLDRAEALIGRPLPLDIA 194
           E G  T +GATTENPSFE+N+ALLSRA V +L+ L+ D L+Q++ RA+ +   P  +D A
Sbjct: 126 ESGLFTFIGATTENPSFEVNSALLSRAAVYVLQSLNEDDLKQIVTRAQDIQAVPA-IDTA 184

Query: 195 AREALLASADGDGRFLLNQVETLY---SIDIPAPLDPAGLSALLHRRVAVYDKDREGHYN 251
           A + L+A ADGD R LLN +ETL      +  + +    L  +L  R+  YDK  E  Y+
Sbjct: 185 AVDRLVAYADGDARRLLNTLETLAVAARAEKLSNISDEWLLRVLGERMRRYDKGGEQFYD 244

Query: 252 LISALHKSLRGSDPQAALYYLARMLTAGEEPLYVLRRLVRFATEDIGLADPQAVIQCLAA 311
            ISALHKS+RGSDP AALY+  RML  G +P Y+ RRLVR A+EDIGLADP+A+   L A
Sbjct: 245 TISALHKSVRGSDPDAALYWFVRMLDGGADPRYMARRLVRMASEDIGLADPRALRLALDA 304

Query: 312 KDAYEFLGSPEGELAIVQACIYCATAPKSNAGYMAMKTAFRTARETGSLMPPMNIVNAPT 371
            + YE LG+PEGELA+ +  +Y A APKSNA Y A        ++  +   PM++ NAPT
Sbjct: 305 AEVYERLGTPEGELALAECVVYLAIAPKSNAVYKAYNAVRALVKKDSTRPVPMHLRNAPT 364

Query: 372 KLMKQVGYGKNYQYDHDAEGGF-SGANYWPEEMSPQTFYTPTERGFEARIAERIAYWNKL 430
           KLMK++ YGK Y+Y HD EGGF +G  Y P+ +  Q FY P +RG E RI E++    +L
Sbjct: 365 KLMKELDYGKGYRYAHDEEGGFAAGERYLPDGLEGQVFYEPVDRGLEIRIGEKLRELRRL 424

Query: 431 RAE 433
            AE
Sbjct: 425 NAE 427