Pairwise Alignments

Query, 437 a.a., Replication-associated recombination protein RarA from Sphingobium sp. HT1-2

Subject, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

 Score =  398 bits (1022), Expect = e-115
 Identities = 217/431 (50%), Positives = 289/431 (67%), Gaps = 13/431 (3%)

Query: 3   DLFSSDDVLPAGIDHAPLADRLRPAVLADVVGQEHLTGPDGAIGRMVAAGRLSSILFWGP 62
           DLF S+ V        PLA RLRP+ L + VGQEHL      +   +  G L S++FWGP
Sbjct: 2   DLFRSEPVAQ------PLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGP 55

Query: 63  PGTGKTTISRLLADAVGMRFEPISAVFSGVADLKKVFAAAKDH-GRRGEKTLLFVDEIHR 121
           PG GKTT++RLLA      FE +SAV +GV ++++    AK   G+ G +T+LFVDE+HR
Sbjct: 56  PGVGKTTLARLLAQFCDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHR 115

Query: 122 FNRAQQDSFLPFVEDGTVTLVGATTENPSFELNAALLSRAQVLILRRLDADALEQLLDRA 181
           FN++QQD+FLP+VEDGT+  +GATTENPSFELN ALLSRA+V +L+ LD  AL +L++RA
Sbjct: 116 FNKSQQDAFLPYVEDGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRA 175

Query: 182 ----EALIGRPLPLDIAAREALLASADGDGRFLLNQVETLYSI-DIPAPLDPAGLSALLH 236
                 L  R L +   A + L+A+ADGDGR +LN +E    + +  + +D   L +LL 
Sbjct: 176 LTEERGLGKRNLRVGDDAFKMLMAAADGDGRRMLNFLENASDLAEDGSEIDVEMLQSLLG 235

Query: 237 RRVAVYDKDREGHYNLISALHKSLRGSDPQAALYYLARMLTAGEEPLYVLRRLVRFATED 296
                +DK  E  Y+ ISALHKS+RGS+P  ALY+ ARML  G +PLY+ RR+VR A+ED
Sbjct: 236 DSRRRFDKGGEAFYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASED 295

Query: 297 IGLADPQAVIQCLAAKDAYEFLGSPEGELAIVQACIYCATAPKSNAGYMAMKTAFRTARE 356
           IG ADP+A+  CLAA D  E LGSPEGELA+ QA  Y A APKSNA Y+  KTA R A E
Sbjct: 296 IGNADPRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAE 355

Query: 357 TGSLMPPMNIVNAPTKLMKQVGYGKNYQYDHDAEGGF-SGANYWPEEMSPQTFYTPTERG 415
            GSL  P+++ NAPTKLMKQ+GYG  Y+Y HD    + +G +Y+P+E+ P+ +Y P  RG
Sbjct: 356 HGSLEVPLHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRG 415

Query: 416 FEARIAERIAY 426
            E +I E++ +
Sbjct: 416 LELKIGEKLRH 426