Pairwise Alignments

Query, 437 a.a., Replication-associated recombination protein RarA from Sphingobium sp. HT1-2

Subject, 336 a.a., Holliday junction DNA helicase B (NCBI) from Escherichia coli BW25113

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 4   LFSSDDVLPAGIDHAPLADR-LRPAVLADVVGQEHLTGPDGAI--GRMVAAGRLSSILFW 60
           L S+   LP  +     ADR +RP +L + VGQ  +            +    L  +L +
Sbjct: 7   LISAGTTLPEDV-----ADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIF 61

Query: 61  GPPGTGKTTISRLLADAVGMRFEPISA-VFSGVADLKKVFAAAKDHGRRGEKTLLFVDEI 119
           GPPG GKTT++ ++A+ +G+     S  V     DL  +    + H       +LF+DEI
Sbjct: 62  GPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPH------DVLFIDEI 115

Query: 120 HRFNRAQQDSFLPFVED 136
           HR +   ++   P +ED
Sbjct: 116 HRLSPVVEEVLYPAMED 132