Pairwise Alignments

Query, 474 a.a., Two-component transcriptional response regulator, LuxR family from Sphingobium sp. HT1-2

Subject, 475 a.a., Sigma-54 dependent transcriptional regulator/response regulator from Pseudomonas putida KT2440

 Score =  253 bits (645), Expect = 1e-71
 Identities = 174/478 (36%), Positives = 260/478 (54%), Gaps = 35/478 (7%)

Query: 16  VVIDDDDDILLAARLLLRAIFGEVLTFRDPESAFAATAGLTPEAFLLDANFSRGATNAAE 75
           +V++DD+ +    R  L     EV+     E A        P+A L D +          
Sbjct: 6   LVVEDDEILADNIRTYLSLKGYEVIVCHSAELALEQIKRAQPDAVLTDNSLP-----GMS 60

Query: 76  GFEWLGRFLARDPQAVIVMITAHAGVQVAIEAMKRGATDFVTKP-------WSNERLLAT 128
           G + L   +A+ P   ++M+T +  V+ A++AMK GA  ++TKP        + ++ LAT
Sbjct: 61  GHDLLRTLVAQAPDLKVIMMTGYGNVEDAVQAMKEGAFHYLTKPVVLAELKLTLDKALAT 120

Query: 129 VRTAAALRASRKAVAQKDKVAMIAAAPAGETPLLGTSPAMARVQ----QLID---RAAPT 181
            R    L   ++  AQK          +G   L+G SP M  ++    Q++D   R A  
Sbjct: 121 ERMERTLSFYQEREAQK----------SGLQALIGESPVMLTLKHTLRQVLDAERRMASD 170

Query: 182 DAN-VLILGENGTGKELVARELHRRSRRAERIMLPVDLGAVAESVIDSELFGHVKGAFTD 240
           D   VLI GE GTGKELVAR LH    R++   +  +  ++  +++++ELFGH KGAFTD
Sbjct: 171 DLPPVLIEGETGTGKELVARALHFDGSRSKGPFIEFNCASIPANLLEAELFGHEKGAFTD 230

Query: 241 ARADRIGRLQAADGGTLFLDEIGNLPLHLQPKLLTALEQRKVTPVGANKPVPVDIRVIAA 300
           A+  R+G ++AADGGTLFLDEIG + L LQ KLL  LE R +  +GA K   VD+RVI+A
Sbjct: 231 AKERRVGLVEAADGGTLFLDEIGEMDLVLQAKLLKLLEDRSIRRIGAVKERKVDLRVISA 290

Query: 301 TNLSAGQIADEGRFRQDLLFRLNTVEIVLPPLRERREDIHALIAHYHALYARKYAQPVHP 360
           TN +  Q+  +G+FR+DL FRL  + + +P L  R +DI  L  H+ A ++R+Y +P   
Sbjct: 291 TNCNLEQMVQQGKFRRDLFFRLRIIALKVPRLYSRGQDILLLARHFLAHHSRRYGKPNLR 350

Query: 361 IAPELMAALVAYDWPGNVRALRHAIERAVILAGDAPFGIEDIPLRSHGSPEPV-RIDRAA 419
            + E  + L+ Y WPGNVR LR+ +E+ V+LA +       + L      EP+ +   AA
Sbjct: 351 FSAEAESLLLGYSWPGNVRELRNMLEQTVLLAPNEVVQAHQLNLCMTLVDEPLAQQPMAA 410

Query: 420 VVEAP---PTPDDMNLERVERRLVETALMKHGYNISSAAAELGLTRASLYRRMEKHGL 474
           + E P   P P   +L  +ER LV   L +  +N++ +A  LGL+R  L  R+EK GL
Sbjct: 411 MFEMPRHEPEP-GTSLPDMERDLVCKTLDRTDWNVTKSARMLGLSRDMLRYRIEKLGL 467