Pairwise Alignments

Query, 380 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Sphingobium sp. HT1-2

Subject, 387 a.a., acetylornithine deacetylase from Agrobacterium fabrum C58

 Score = 90.1 bits (222), Expect = 9e-23
 Identities = 103/391 (26%), Positives = 156/391 (39%), Gaps = 44/391 (11%)

Query: 13  LAERLLACPSVTPAVG--DVFAELEAMLVPLGFTVDRFVSGVAPDGPVENLLAWRTTGAG 70
           LAE ++A  S  P  G  DV   +E +L   GF+V   ++   P     N+ A    G G
Sbjct: 14  LAE-IIAIRSENPPGGEADVAVYVERLLKDEGFSVS--LTEYKPGR--FNVEARIENGPG 68

Query: 71  PHFAFAGHLDVVPPGHGWASDPFTPVVRGDLLYGRGAVDMKGAIAAFVAALHELP---DA 127
           P FAF  H+D VP G GW +D F        L+GRGA D KG + A + A+  L     A
Sbjct: 69  PVFAFNTHMDTVPAGDGWTTDAFILREDDGKLFGRGACDCKGPLIAMIEAMRMLAADRTA 128

Query: 128 LPGTISLIITGDEEGPATYGTLALMDRMVAHGLHP--DMCLVGEPTSSARLGDVVKIGRR 185
             GT+  +  GDEE       +A           P  D  +VGEPTS+           +
Sbjct: 129 WSGTLLGVFVGDEE-------IASEGAKYYAAARPKIDFAVVGEPTSNTTYS-----AHK 176

Query: 186 GSVNMWIKVAGTQGHVAYPHLADNPIPALVRILAKIDAEVLDTGTDWFQP----SNIEIT 241
           GS+   ++V G   H   PHL DN I    ++L  ++A   +       P    +++ +T
Sbjct: 177 GSLRPVVRVHGVTAHSGTPHLGDNAIYRAGQLLTLVEAFHNNVVRKRTHPLVGEASLTVT 236

Query: 242 DLEVGNPAHNVIPASATARISIRFNDQHSGASLIDRISAIAASEGGSVEAKISGEPFLTQ 301
            +  G  A NV+P S    +  R     S  ++    + +          K     +   
Sbjct: 237 RIS-GGHADNVLPGSCDLLLDRRMVPGESEDAVKQEFATLLKDAYDRFGVKAEIVDYKAT 295

Query: 302 PGTLSTLISDAIRDVTGLETELSTTGGTSD------------ARFLSRLCPVAEFGLNNA 349
            G+ +   +D  + +     E     GTSD              F S        G  + 
Sbjct: 296 TGSATETAAD--QSIVAASLEACRASGTSDPGPFGFQGGCDLVHFRSLGAQGTVIGPGSL 353

Query: 350 TM-HKLDEAVAVADLHDLTHIYRLITERALR 379
           ++ HK DE V + +    + IYR +  + LR
Sbjct: 354 SVAHKADEFVPLDEFVTCSVIYRDVARKMLR 384