Pairwise Alignments

Query, 683 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Sphingobium sp. HT1-2

Subject, 695 a.a., putative efflux transporter from Pseudomonas putida KT2440

 Score =  294 bits (753), Expect = 8e-84
 Identities = 222/675 (32%), Positives = 336/675 (49%), Gaps = 19/675 (2%)

Query: 9   DALFTLKAFLAAMLAYYIALRIGLDRPYWAIITAYIVAQPLAGAVSSKAMFRLLGTVIGA 68
           D  + ++ F A+M+A YIAL + L RPYWA+ T YIV+ P  G  SSKA++R +GT++GA
Sbjct: 13  DWFYGVRTFGASMIALYIALLMQLPRPYWAMATVYIVSSPFVGPTSSKALYRAVGTLLGA 72

Query: 69  GVAILLVPLLGNAPELLSLALALWLGLCTFVALLDRTPRAYTFLLAGYTAGIVAFPAVEA 128
           G AI LVP L  +P LLS+A+ALW G   F++L  RT   Y  +LAGYT  ++A   V+ 
Sbjct: 73  GGAIFLVPPLVQSPLLLSIAVALWTGTLLFLSLNLRTANNYVLMLAGYTLPMIALAVVDN 132

Query: 129 QATIFTAASLRAQEIGIGIASATLVHSLVFPRTVSARLQARIDAIMIDAERWSRDSLRVD 188
              +F  AS RAQEI +GI  A +V ++ +PR ++  +         +A R+S   L  D
Sbjct: 133 PLAVFDVASSRAQEICLGIVCAAVVGAIFWPRRLAPVVVGATGNWFNEAIRYSDTYLARD 192

Query: 189 HGDAVVTRDRRQLATDIHELNQLATHLPFESSALRLKAGVLRALETQLCLLLPLASAVED 248
                V   R  + T  + L  +   L  E +         R L  ++  LLP+  A++D
Sbjct: 193 ASADKVGGMRGAMVTTFNSLELMIGQLAHEGAGPHTLKNA-RELRGRMIHLLPVIDALDD 251

Query: 249 RCRQLQ-RANALPPAVHALLDDVVAWL-GAPDGEGASPEA-LRTRARACEPDCRLPFAWH 305
               L+ RA A    +  +L+    WL G  D    +  A L  +    +P         
Sbjct: 252 ALVALEGRAPAQFAQLQPVLEAAREWLKGTADSASVAHWATLHEQIGRLQPATAALDQRA 311

Query: 306 AALQLSMLDRLAELVAVHAICRELQAAMGADRIPLSPPAREAIRNAR--RRVLHRDYGLA 363
             L  + L RL E   +   C  LQ A+  D    + P R   R+ R  R     D GL 
Sbjct: 312 ELLLSNALYRLTEWADLWQDCCTLQHALRTDD---AKPWRAVYRHWRLGRLTAFFDRGLM 368

Query: 364 LRGALATSLTVLIGCLLWILSAWPAGAGAVVIASIICALFSNMDDPAPAAWKVWQGTCCA 423
           L    +T L +++ C LWI   W  GA AV++A++ C+ F+ MDDPAP  ++ +  T  +
Sbjct: 369 LYSVASTVLAIVVACGLWIGLGWNDGASAVILAAVACSFFAAMDDPAPQIYRFFFWTLMS 428

Query: 424 VLVAAPYAFAILPRVSDFPVLVAVLAPAFLLVGAMMVRRRLAAMAIGMILSLPGLMGLDG 483
           V+ ++ Y F +LP + DFP+LV   A  F+ +G + V+ R     +  I++    + + G
Sbjct: 429 VIFSSLYLFLVLPNLHDFPMLVLAFAVPFICIGTLTVQPRFYLGTLLTIVNTSTFISIQG 488

Query: 484 YYTGQFDSFANAAIAQMLGALLA-VWALKMVRTVGAEQSALRLLRAGWRDLALRTDPRQQ 542
            Y   F +F N+ +A   G L A +W L M R  G E +A R+ R  WRD+   T+P   
Sbjct: 489 AYDADFFTFLNSNLAGPAGLLFAFIWTLVM-RPFGVELAAKRMTRFAWRDIVEMTEPATL 547

Query: 543 PDTVKWINTMLDRIGLLTPRLAELGSDTTAPLLDILRDTRVGMSLDDLHRFRVRAHARDD 602
            +  +    MLDR+    PRL++ G D+       LRD RVG++L DL  +  RA  +  
Sbjct: 548 AEHRQVGVQMLDRLMQHLPRLSQTGQDSGV----ALRDLRVGLNLLDLLAYMPRAGQQAR 603

Query: 603 RLLDVVLGRVRQHFDRLGARGQGDPDP-ALVRAIDTALATIGRNGAVD--DRRLALL-AL 658
             L+ V+  V  H+      G+    P AL+R ++ A   +  +   +  D R  LL AL
Sbjct: 604 ERLNTVVEEVGAHYAACLRAGERLHAPAALLRNMERARLALNLDELYERGDARTHLLHAL 663

Query: 659 TSLRRNIAPDVPLSL 673
           + LR  + P V + L
Sbjct: 664 SGLRLALLPGVEVML 678