Pairwise Alignments

Query, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Sphingobium sp. HT1-2

Subject, 324 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  117 bits (293), Expect = 4e-31
 Identities = 82/280 (29%), Positives = 140/280 (50%), Gaps = 13/280 (4%)

Query: 43  RLLFKAAG-IQPTGFDLVYSEFQSGHLVVEALNGGSLDYGGMSEIPPIFAAASTIQSFRQ 101
           + L +A+G  +   +D+ ++EF S   + EALN G++D G + + P +FA  +   S + 
Sbjct: 42  KALLEASGESENVPYDIRWAEFPSASPLGEALNAGAVDIGALGDAPYVFALGAGA-SLKV 100

Query: 102 IAVAHGDVNNQVVLV-PKGSKARSIADLKGKRVGYVRATTAQYFLIRMLEEVGLNWDDII 160
           +++ H +  N   LV  + S  +++ADLKGK++   R +   Y  I+ L   GL   D+ 
Sbjct: 101 VSIIHAEGRNTTALVVTRNSPIKTVADLKGKKIVTGRGSIGHYLAIKALATAGLTTQDVQ 160

Query: 161 PVAMGVSDGAAAFSQGALDAWAIYGFPIQRAIATEG-ARILRTANGILSGNYLVSAHVDA 219
            + +  S+       G  DAWA +  P    + ++  AR+L + N +LS +  ++A   A
Sbjct: 161 FIFLLPSESRLVLDNGTADAWATWD-PYTTVVTSQSQARVLISGNKLLSNHLYLAATRQA 219

Query: 220 LADPDKAAIIREYLALVQKGFGWAAAHQDEWAGIVAQDIGVPRDYVLDQFRRKSATYELR 279
           +A  DK   + +++A V + + WA  H  E+A   A+  G+P    LD     +    L 
Sbjct: 220 IA--DKRPQLDDFVARVDRAYAWANVHPHEYAAAQAKITGLP----LDVHVEVAKDTHLT 273

Query: 280 PVTPE--AIGSQQQVADVFFKAGLVPKRVDVRPLWDARFN 317
           PV  +   I   Q  AD + K GL+ K +DV   +D  FN
Sbjct: 274 PVAIDDAVISGLQTTADTYQKEGLLLKHIDVSQGFDKSFN 313