Pairwise Alignments

Query, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Sphingobium sp. HT1-2

Subject, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

 Score =  105 bits (261), Expect = 2e-27
 Identities = 74/259 (28%), Positives = 130/259 (50%), Gaps = 6/259 (2%)

Query: 51  IQPTGFDLVYSEFQSGHLVVEALNGGSLDYGGMSEIPPIFAAASTIQSFRQIAVAHGDVN 110
           + P G  + + EF +G  ++EAL+ G++D G  ++ P +FA A+  +    +A       
Sbjct: 64  LAPQGVKVSWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAG-KPVVYLAAEQPYPR 122

Query: 111 NQVVLVPKGSKARSIADLKGKRVGYVRATTAQYFLIRMLEEVGLNWDDIIPVAM-GVSDG 169
              ++V +     S+ DLKGKRV   R   AQY L   L++ GL++ DI P  +   +D 
Sbjct: 123 GIGLVVREQDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADA 182

Query: 170 AAAFSQGALDAWAIYGFPIQRAIATEGARILRTANGILSGNYLVSAHVDALADPDKAAII 229
            AA   G++ A  ++   +  A +  G + LR  +G LS N        + AD  + A++
Sbjct: 183 VAALQSGSVQAVTLWDPFLAAAESQPGLKNLRDGSG-LSNNRTFYLSTASFADQHR-ALL 240

Query: 230 REYLALVQKGFGWAAAHQDEWAGIVAQDIGVPRDYVLDQFRRKSATYELRPVTPEAIGSQ 289
           + + A + K   WA A   E A ++A  +G+    +     R++  Y    +TP+ +  Q
Sbjct: 241 KTFFAELGKVSQWANAKPAEVAALLAPQLGISTQVLEVASERRN--YNAVAITPQIVAEQ 298

Query: 290 QQVADVFFKAGLVPKRVDV 308
           Q++AD F   GL+P+++ V
Sbjct: 299 QKLADTFQGLGLIPRKLQV 317