Pairwise Alignments

Query, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Sphingobium sp. HT1-2

Subject, 312 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  108 bits (271), Expect = 1e-28
 Identities = 89/313 (28%), Positives = 142/313 (45%), Gaps = 19/313 (6%)

Query: 15  LLLTACGTAGKSRPKLRVSITGKGDGDTRLLFKAAGI-QPTGFDLVYSEFQSGHLVVEAL 73
           L  T   T        +  + G    + R + +AAG+ +   + L + +F +G  V EAL
Sbjct: 7   LAATVLATTFSLAAAAQTLVVGDQSYNARAVMEAAGVLEQLPYTLEWKQFTAGSPVAEAL 66

Query: 74  NGGSLDYGGMSEIPPIFAAASTIQSFRQIAVAHGDVNNQVVLVPKGSKARSIADLKGKRV 133
           N GSLD G + + PP+F  A      + IAV+  ++    +L  K S   S+ DL+GKR 
Sbjct: 67  NVGSLDIGLLGDAPPLFLGALGAP-IKVIAVSRQNLEGVAILARKDSPIHSLQDLRGKRA 125

Query: 134 GYVRATTAQYFLIRMLEEVGLNWDDIIPVAMGVSDGAAAFSQGALDAWAIYGFPIQRAIA 193
              + + +Q  L   L++ G+  D +    +   D + A   G++D  A +  P      
Sbjct: 126 AIWKGSWSQQLLFSALDKAGVPRDAVELRYLSALDASHALDGGSVDVIATWE-PYVTQQE 184

Query: 194 TEGARILRTANGILSGNYLVSAHVDALADPDKAAIIREYLALVQKGFGW-------AAAH 246
            +GAR+L TA+G++     V A+  A+    K A I ++L  ++K   W         A+
Sbjct: 185 RQGARVLATADGVIPAQSFVVANSKAV--ELKRAQIADFLQRLKKARDWTLSAPANTEAY 242

Query: 247 QDEWAGIVAQDIGVPRDYVLDQFRRKSATYELRPVTPEAIGSQQQVADVFFKAGLVPKRV 306
            D WA +   D    RD     F R  A  +L P+ P+ I   Q+  D F   GL+ K  
Sbjct: 243 ADAWAKLTRAD----RDIARAWFAR--ARTDLAPLDPQVIADAQKTVDFFSGLGLI-KAY 295

Query: 307 DVRPLWDARFNDA 319
             + L+D  FN A
Sbjct: 296 PAQSLFDTSFNAA 308