Pairwise Alignments

Query, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Sphingobium sp. HT1-2

Subject, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

 Score =  141 bits (356), Expect = 2e-38
 Identities = 100/313 (31%), Positives = 159/313 (50%), Gaps = 19/313 (6%)

Query: 4   RRNLLGAAAGSLLLTACGTAGKSRPKLRVSITGKGDGDTRLLFKAAG-----IQPTGFDL 58
           RR L+   A ++   A   A      LR+     G   T +L KA G     +   G  +
Sbjct: 7   RRGLVALFAAAVSFGAITQA--QAESLRIGYQKYG---TLVLLKAKGTLEKRLAEQGVQV 61

Query: 59  VYSEFQSGHLVVEALNGGSLDYGGMSEIPPIFAAASTIQSFRQIAVAHGDVNNQVVLVPK 118
            ++EF  G  ++E LN GS+D+G   E PP+FA A+       +A      +++ +LVPK
Sbjct: 62  QWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLL-YVAYEPPAPHSEAILVPK 120

Query: 119 GSKARSIADLKGKRVGYVRATTAQYFLIRMLEEVGLNWDDIIPVAMGVSDGAAAFSQGAL 178
           GS  +S+ DLKGK+V   + +   Y L+R LE+ GL + DI PV +  +D  AAF +G++
Sbjct: 121 GSPIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGSV 180

Query: 179 DAWAIYGFPIQRAIATE-GARILRTANGILSGN-YLVSAHVDALADPDKAAIIREYLALV 236
           DAW I+  P Q A   +  AR LR   G++  + + ++    A   P   A+I   +  V
Sbjct: 181 DAWVIWD-PYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHP---AVINTVIEEV 236

Query: 237 QKGFGWAAAHQDEWAGIVAQDIGVPRDYVLDQFRRKSATYELRPVTPEAIGSQQQVADVF 296
           +    W+ A+  E    VA  +G+P    L   +R+   Y   P+TPE + +QQ++AD F
Sbjct: 237 RAVGEWSQANPQEVTDQVAPLLGLPAGITLTSVKRQG--YGAAPLTPEVVAAQQKIADTF 294

Query: 297 FKAGLVPKRVDVR 309
               L+PK + ++
Sbjct: 295 QALKLIPKPLSIK 307