Pairwise Alignments

Query, 272 a.a., Alkanesulfonates transport system permease protein from Sphingobium sp. HT1-2

Subject, 262 a.a., alkanesulfonate transporter permease subunit from Pseudomonas simiae WCS417

 Score =  239 bits (610), Expect = 4e-68
 Identities = 123/245 (50%), Positives = 168/245 (68%)

Query: 28  WLSPLLLLLLWELGSRTGLIPERTLAAPSAVIGTLIQMVLSGELPSNLLVSFGRVAVGLL 87
           W+ P+LLL++W+L    G +  R L APSAVI   I +V SGE+ ++L +S  R  +G L
Sbjct: 13  WVLPVLLLVVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAISGWRAGLGFL 72

Query: 88  IGVGLGLALGLAAGLSRGAELAIDPLMQIKRTIPALALTPLFIVWFGIGETPKIALIAFG 147
           IG  +GLALG   GLS+  E  +D  +Q+ R +P LAL PL I+WFGI ET KI L+A G
Sbjct: 73  IGGSIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGIDETAKIFLVALG 132

Query: 148 TIFPVYLNLYAGIRGVDPRLLDAAKSFGLSRWEQVWHVVLPAALPSLLVGLRYALSISIL 207
           T+FP+YLN Y GIR VDP L++ ++S+GLS +     V+LP ALPS+LVG+R+AL    L
Sbjct: 133 TLFPIYLNTYHGIRNVDPALVEMSRSYGLSGFSLFRQVILPGALPSILVGVRFALGFMWL 192

Query: 208 VLVVAEQINASAGLGYLINNARDFMRTDIIVVCLMVYAILGLGADWLVRSLEARALVWRP 267
            L+VAE I+ASAG+GYL  NAR+F++TD++V+ +++YAILG  AD   R LE   L W P
Sbjct: 193 TLIVAETISASAGIGYLAMNAREFLQTDVVVLAIVMYAILGKLADLAARGLERVWLRWHP 252

Query: 268 SIVEN 272
           +   N
Sbjct: 253 AYQVN 257