Pairwise Alignments

Query, 700 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Sphingobium sp. HT1-2

Subject, 692 a.a., junction-specific ATP-dependent DNA helicase from Pseudomonas putida KT2440

 Score =  482 bits (1241), Expect = e-140
 Identities = 295/671 (43%), Positives = 395/671 (58%), Gaps = 36/671 (5%)

Query: 26  ISALKGIGPALARPLERLGLARAVDVAFHLPVNYVDRKLIDELDMADAGK--VIGIMLTP 83
           ++ LKG+G A+A  L ++GL    DV FHLP+ Y DR  +  +     G+  VI  +++ 
Sbjct: 9   VTVLKGVGEAMAEKLAKVGLENLQDVLFHLPLRYQDRTRVVPIGQLRPGQDAVIEGVVSG 68

Query: 84  VDYRASGNARAPFRVQAVDAHGNAVSLVYFGRNSAWPRKLLPLNEPKFVSGKLEAYGDNL 143
            D           R+      G+ V  + F   S   ++ L         G+       L
Sbjct: 69  ADVTMGKRRSLVVRL----GDGSGVLTLRFYHFSNAQKEGLKRGTHLRCYGEARPGASGL 124

Query: 144 QMVHPDYVL-------PPEEADTVPARESVYGLSEGLTNNRMRDLVGQALARAP--ELPE 194
           ++ HP+Y         PP E    P    +Y  +EGLT  R+R L  Q+LA      LP+
Sbjct: 125 EIYHPEYRALNGNEPPPPVEQTLTP----IYPSTEGLTQQRLRLLCQQSLALLGPRSLPD 180

Query: 195 WIEPSLLASKGWPAWRAALERFHADPTDAQ----------ARERLAYDEIFAGQLALMLV 244
           W+   L           A+   H  P DA           A+ RLA++E+   QL+   +
Sbjct: 181 WLPDELARDYQLAPLDEAIRYLHNPPADADLDELAEGQHWAQHRLAFEELLTHQLSQQRL 240

Query: 245 RQSSRRRRGVPISGDGRLRA--MLKLPFAPTGAQRRAIGEIEGDMAQATPMLRLLQGDVG 302
           R+S R  R   +    RL+A  +  L F PTGAQ+R   EI  D++Q  PM+RL+QGDVG
Sbjct: 241 RESLRSLRAPVLPRATRLQAQYLANLGFQPTGAQQRVANEIAYDLSQHEPMMRLVQGDVG 300

Query: 303 SGKTLVALMALLNAVEAGMQGAMLAPTEILARQHYETLRKMASGLPIEIAILTGREKGKV 362
           +GKT+VA +A L A+EAG Q A++APTEILA QHY T ++    L IE+A L G+ KGK 
Sbjct: 301 AGKTVVAALAALQALEAGYQVALMAPTEILAEQHYITFKRWLEPLGIEVAWLAGKLKGKA 360

Query: 363 REATLMGLANGSIHILVGTHAIFQEKVQYKALGLAVIDEQHRFGVAQRMMLASKA---ER 419
           R A+L  +ANG+  ++VGTHA+FQE+V++K L LA+IDEQHRFGV QR+ L  K    E 
Sbjct: 361 RAASLEQIANGA-PMVVGTHALFQEEVRFKHLALAIIDEQHRFGVQQRLALRRKGVAGEL 419

Query: 420 SPHLLVMTATPIPRTLTLTYYGEMDVSRLDEMPPGRQPIQTLVMSANRLDEVVEGLARHV 479
            PH L+MTATPIPRTL ++ Y ++D S LDE+PPGR P+ T++++ +R  EVVE +    
Sbjct: 420 CPHQLIMTATPIPRTLAMSAYADLDTSVLDELPPGRTPVNTVLVADSRRFEVVERVRAAC 479

Query: 480 EGGGQAYWVCPLVEESETSDQAAAEMRAETLRQRFGD-RVGLVHGKMKGPDKDAAMEAFA 538
             G QAYWVC L+EESE     AAE   E L    G+ +VGL+HG+MK  +K   M  F 
Sbjct: 480 AEGRQAYWVCTLIEESEELTCQAAESTYEELGSALGELKVGLIHGRMKPAEKAEIMAEFK 539

Query: 539 ANRTQILVATTVIEVGVDVPNSSLIVIEGAERFGLAQLHQLRGRVGRGDKPSVCLLLRGN 598
           A   Q+LVATTVIEVGVDVPN+SL++IE  ER GLAQLHQLRGRVGRG   S C+LL   
Sbjct: 540 AGNLQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHP 599

Query: 599 ALGETSRARLALMRETNDGFRIAEEDLKLRGAGEVLGTRQSGEAELKIATPEHVSALVDA 658
            L +  R RL +MRETNDGF IAE+DL+LRG GE+LGTRQ+G  + K+A     + L+ A
Sbjct: 600 PLSQIGRERLGIMRETNDGFIIAEKDLELRGPGEMLGTRQTGLLQFKVADLMRDADLLPA 659

Query: 659 ARDDAHLLIDR 669
            RD A  L+ R
Sbjct: 660 VRDAAQALVSR 670