Pairwise Alignments

Query, 700 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Sphingobium sp. HT1-2

Subject, 1116 a.a., transcription-repair coupling factor (mfd) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  239 bits (609), Expect = 7e-67
 Identities = 144/378 (38%), Positives = 213/378 (56%), Gaps = 18/378 (4%)

Query: 270 FAPTGAQRRAIGEIEGDMAQATPMLRLLQGDVGSGKTLVALMALLNAVEAGMQGAMLAPT 329
           F  T  Q  A G+++ DM +  PM RL+ GDVG GKT VA+ A   A+    Q A+L PT
Sbjct: 559 FEDTPDQAVATGDVKADMEKPYPMDRLVCGDVGFGKTEVAIRAAFKAINDRKQVAVLVPT 618

Query: 330 EILARQHYETLRKMASGLPIEIAILTG-REKGKVREATLMGLANGSIHILVGTHAIFQEK 388
            ILA QHY T ++   G P+++  +   R   +V+E T   + +G I ILVGTH I  + 
Sbjct: 619 TILAMQHYRTFKERLEGFPVKVDYINRFRTTKQVKEITKQ-VTSGEIDILVGTHRIVNKD 677

Query: 389 VQYKALGLAVIDEQHRFGVAQRMMLASKAERSPHLLVMTATPIPRTLTLTYYGEMDVSRL 448
           VQ+K LGL +IDE+ +FGV  +  L  +   +  +L +TATPIPRTL  +  G  D+S +
Sbjct: 678 VQFKDLGLLIIDEEQKFGVKVKDQL-KELRVNVDVLTLTATPIPRTLHFSLMGARDLSVI 736

Query: 449 DEMPPGRQPIQTLVMSANRLDEVV-EGLARHVEGGGQAYWVCPLVEESETSDQAAAEMRA 507
              PP RQP+ T + +    +EV+ + ++R ++ GGQ ++V   V E ++       +  
Sbjct: 737 ATPPPNRQPVTTEIHTFE--EEVIRDAVSRELQRGGQVFFVHNRVGEIDSIANLIMRLVP 794

Query: 508 ETLRQRFGDRVGLVHGKMKGPDKDAAMEAFAANRTQILVATTVIEVGVDVPNSSLIVIEG 567
           +        ++   HG+M G   +  M  F      +LV+T +IE G+D+PN++ I+I  
Sbjct: 795 DA-------KIAGAHGQMDGKQLEKIMVKFIEGEFDVLVSTNIIESGLDIPNANTIIINR 847

Query: 568 AERFGLAQLHQLRGRVGRGDKPSVCLLLRGNALGETSRARLAL-----MRETNDGFRIAE 622
           A  FGL+ LHQ+RGRVGR +K + C LL     G T+ AR  L       +  DGF++A 
Sbjct: 848 AHMFGLSDLHQMRGRVGRSNKKAYCYLLTSPMSGLTAEARKRLQTLEEFSDLGDGFKVAM 907

Query: 623 EDLKLRGAGEVLGTRQSG 640
            DL +RGAG +LG  QSG
Sbjct: 908 RDLDIRGAGNLLGAEQSG 925