Pairwise Alignments

Query, 748 a.a., General secretion pathway protein D from Sphingobium sp. HT1-2

Subject, 441 a.a., pilus assembly protein PilQ from Pseudomonas simiae WCS417

 Score = 84.7 bits (208), Expect = 9e-21
 Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 11/195 (5%)

Query: 460 LASATGIVGGLG-TQIGKNGIFGAIINAVKSDTESNLLSTPSVMTLDNQKASILVGQQVP 518
           L S TG   GLG   I  N +    + A++      ++S P V+T D + A IL G ++P
Sbjct: 250 LGSLTG-TSGLGIAYITDNLLLDLELTAMEKTGNGEIVSQPKVVTSDKETARILKGTEIP 308

Query: 519 VTTGEALSQNFDNQFRTVQRQDVGIKLEVKPQINTGGAIKLFLKQEVSSVAGPVSNSSSD 578
                   ++  +   +V  ++  + LEV PQI      ++ ++ +V+       N  +D
Sbjct: 309 Y------QESSSSGATSVSFKEASLSLEVTPQITPDD--RVIMEVKVTKDEPDYLNKLND 360

Query: 579 LI-INKREIETTVTVDDGEILALGGLLDDNERKTIERIPLLSDIPGIGELFKSRSKSRTK 637
           +  I K E+   V V DGE + +GG+  + + K ++++P L D+P +G LF+    +  K
Sbjct: 361 VPPIKKNEVNAKVLVKDGETIVIGGVFSNTQSKVVDKVPFLGDVPYLGRLFRRDVLAEKK 420

Query: 638 TNLMVFIRPTILRTK 652
           + L+VF+ P I+  +
Sbjct: 421 SELLVFLTPRIMNNQ 435



 Score = 36.2 bits (82), Expect = 4e-06
 Identities = 32/162 (19%), Positives = 73/162 (45%), Gaps = 15/162 (9%)

Query: 27  TLNVRDADIRAFIQDAARVTGRTFIIDNRVQGKVSVVTDRPLSKSEYFEIVLSTLRANGL 86
           +LN +  ++R  +Q  A V G   +  + VQG +++   + +S  +  ++V   L+A GL
Sbjct: 31  SLNFQSIELRTALQQIADVAGLNLVASDDVQGSITLRL-KDVSWDQALDLV---LQAKGL 86

Query: 87  VAVPAPGGAYRIQPADGAAGQP-------SAVGRAATRNSFVTEVFRLRSVDAASVLET- 138
                  G   + PA+  A +          +   A     + +V   ++ D A + ++ 
Sbjct: 87  -DKRVKAGVLLVAPAEELAARELLTLESRKQMAELAPLRRELLQVNYAKAADLAKLFQSV 145

Query: 139 --LRPLISKEGTVTANRAGNSIVVADYADNVARIRQVIARVD 178
             L  +  + G+V  +   N+I+     + +  +R+++A++D
Sbjct: 146 TGLEGVTDERGSVAVDDRTNNIIAYQTVERLEELRRIVAQLD 187