Pairwise Alignments

Query, 405 a.a., General secretion pathway protein F from Sphingobium sp. HT1-2

Subject, 403 a.a., Type II secretion pathway protein XcpS from Pseudomonas putida KT2440

 Score =  156 bits (394), Expect = 1e-42
 Identities = 106/386 (27%), Positives = 199/386 (51%), Gaps = 14/386 (3%)

Query: 20  VKADSLDEARVKLDARKLFVVRLEPGAVSVARKRAGLSLRAPKLSAKELTLFTRQLSTLI 79
           + A+  D+AR + + + L V+ L     ++     G++ R  + +A +L LF+++LSTL+
Sbjct: 25  IDAEDADQARRQAEDQGLRVLSLRSSGGALR----GMAWR--REAAFDLVLFSQELSTLL 78

Query: 80  QVS-PLEESLRTISRQSEQDHVRVIVGKVHSGVLEGRRLADALGAEPKSFPALYRAMISA 138
               PL ++L +++ +S     R ++ ++   + EGR L+ ALG +P+ FP LY A++ +
Sbjct: 79  NAGLPLIDALESLAEKSPAATARKVLAELVRQLYEGRSLSQALGQQPRVFPPLYVALVQS 138

Query: 139 GESSGSLPTIMERLSELMERQAVMRSKVLTAIAYPSVLATFAVFVVAALMIFVVPKVVEQ 198
            E +G+L   + R     +R  ++R K++ A  YP +L      VV  L+ +VVP+  + 
Sbjct: 139 SERTGALGDALTRYISYRQRLDLVRQKLVGASVYPLLLLLVGGGVVLFLLGYVVPRFSQV 198

Query: 199 FDTVGQQLPLLTRLVMGISAFLAGYWWLLLILIGLGAFGFWRALKIDSFRYRFDAMLLGL 258
           F+ +G +LP L+R++M +  FL      L +    G    W   +    RY     L  L
Sbjct: 199 FEGMGTELPWLSRVLMQVGLFLHAQQAPLALGTVGGVAALWLLRRHPRVRYWASCQLRRL 258

Query: 259 PVLGRLIRDLHAARMARTLSTMVASRLPLMEGLSLTANTVHNRV---LRKASDEIVEAIR 315
           P L + +     AR  R+L  ++   +P++  + +    + N     L +AS  + E   
Sbjct: 259 PALHQRLMMYELARFYRSLGILLQGGIPILTAMGMARGLLGNAAAQGLEQASQRVGE--- 315

Query: 316 GGGSLSAALKRAGVFPPLLVYLAASGESAGRLDTMLERAADYLEREFDAFTSAALAMLEP 375
            G  LS AL    +  P+ + L  +GE +G L  MLER AD+ ++E   +    + + EP
Sbjct: 316 -GLPLSDALAAGHLVTPVSLRLLRAGEQSGNLGEMLERCADFHDQEIGRWVEWFVKLFEP 374

Query: 376 IIIILMGGIVAVIILSILLPILQLQS 401
           +++  +G ++ +I++ + +PI +L S
Sbjct: 375 LLMTFIGLLIGLIVILMYMPIFELAS 400